RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 LIMS3P0CW19 117 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 LIMS4P0CW20 117 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 TFPIP10646 304 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 IMPDH2P12268 514 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 LIPAP38571 399 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 CENPAP49450 140 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 RGS6P49758 472 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 OC90Q02509 493 aaPredicted RBP12.78□□□□□ -0.36
SDF2-201ENST00000247020 PON3Q15166 354 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 OR7A5Q15622 319 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 LEG1Q6P5S2 330 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 TUBA3EQ6PEY2 450 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 LSRQ86X29 649 aaPredicted RBP12.78□□□□□ -0.36
SDF2-201ENST00000247020 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 ARIH2OSQ8N7S6 290 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 OR4F15Q8NGB8 312 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 OR51G2Q8NGK0 314 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 NMNAT3Q96T66 252 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 ERVK13-1Q9NX77 482 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 CLEC2DQ9UHP7 191 aa12.78□□□□□ -0.36
SDF2-201ENST00000247020 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
SDF2-201ENST00000247020 BOKQ9UMX3 212 aaPredicted RBP12.78□□□□□ -0.36
SDF2-201ENST00000247020 CAB39Q9Y376 341 aaPredicted RBP12.78□□□□□ -0.36
SDF2-201ENST00000247020 OR6C68A6NDL8 312 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 GJE1A6NN92 205 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 H3BML4 177 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 XKRYO14609 159 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 GLCEO94923 617 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 PMS2P2O95744 297 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 SPI1P17947 270 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 CD96P40200 585 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 CDKN2AP42771 156 aaKnown RBP12.77□□□□□ -0.36
SDF2-201ENST00000247020 DIO1P49895 249 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 BDH1Q02338 343 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 NHLH1Q02575 133 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 MYBPHQ13203 477 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 CTF1Q16619 201 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 MESTQ5EB52 335 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 EXD3Q8N9H8 876 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 OR9Q1Q8NGQ5 310 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 ZNF519Q8TB69 540 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 MIB2Q96AX9 1013 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 GNRHR2Q96P88 292 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 OPALINQ96PE5 141 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 FAM173AQ9BQD7 235 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 ARHGAP9Q9BRR9 750 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 ZNF649Q9BS31 505 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 CXorf56Q9H5V9 222 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 ADGRL4Q9HBW9 690 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 NOX1Q9Y5S8 564 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 KIAA1549Q9HCM3 1950 aa12.77□□□□□ -0.36
SDF2-201ENST00000247020 A6NIZ1 184 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 C12orf71A8MTZ7 269 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 C11orf98E9PRG8 122 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 MS4A18H0YCH9 400 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 LINC01387J3KSC0 135 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 DNPH1O43598 174 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 AHCYL1O43865 530 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 ZIC3O60481 467 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 NEURL1O76050 574 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 IL11P20809 199 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 AHCYP23526 432 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 DNASE1L1P49184 302 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 DAP3P51398 398 aaKnown RBP12.77□□□□□ -0.37
SDF2-201ENST00000247020 BLVRAP53004 296 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 SLC16A1P53985 500 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 RAP1BP61224 184 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 RAP1AP62834 184 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 RAC1P63000 192 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 SLC35A1P78382 337 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 TLE3Q04726 772 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 GALEQ14376 348 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 TGIF1Q15583 401 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 MS4A18Q3C1V0 323 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 GDPGP1Q6ZNW5 385 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 HDDC2Q7Z4H3 204 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 PXKQ7Z7A4 578 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 EGFL6Q8IUX8 553 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 ZNF485Q8NCK3 441 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 OR2T4Q8NH00 348 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 CNN2Q99439 309 aaKnown RBP12.77□□□□□ -0.37
SDF2-201ENST00000247020 OR2B2Q9GZK3 357 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
SDF2-201ENST00000247020 RPH3AQ9Y2J0 694 aaPredicted RBP12.77□□□□□ -0.37
SDF2-201ENST00000247020 FKBP7Q9Y680 259 aa12.77□□□□□ -0.37
SDF2-201ENST00000247020 LOC102725191A0A1B0GVB3 256 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 OR2M5A3KFT3 312 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 LRRC3CA6NJW4 275 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 AKAP8O43823 692 aaKnown RBP12.76□□□□□ -0.37
SDF2-201ENST00000247020 ATE1O95260 518 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 OR2T7P0C7T2 308 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 HSMCR30P0CW71 290 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 CLUP10909 449 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 CPEP16870 476 aa12.76□□□□□ -0.37
SDF2-201ENST00000247020 SDHBP21912 280 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms