RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SERPINB7O75635 380 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 CIB2O75838 187 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 IFNA14P01570 189 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 ETS2P15036 469 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 APOBEC3AP31941 199 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-201ENST00000242776 NTF4P34130 210 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 GPR68Q15743 365 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 KLHL26Q53HC5 615 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 RPS26P11Q5JNZ5 115 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-201ENST00000242776 TYW3Q6IPR3 259 aaKnown RBP12.06□□□□□ -0.48
DDX39A-201ENST00000242776 FRRS1Q6ZNA5 592 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 PEX5LQ8IYB4 626 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 SLC26A7Q8TE54 656 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 RASSF5Q8WWW0 418 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 FAM162AQ96A26 154 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 CCDC124Q96CT7 223 aaKnown RBP12.06□□□□□ -0.48
DDX39A-201ENST00000242776 ASB9Q96DX5 294 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 CLPTM1LQ96KA5 538 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 TRIM15Q9C019 465 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 BPESC1Q9GZL8 116 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 ADAM19Q9H013 955 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 SAP130Q9H0E3 1048 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 MTHFD2LQ9H903 347 aaPredicted RBP12.06□□□□□ -0.48
DDX39A-201ENST00000242776 FKRPQ9H9S5 495 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 ASB6Q9NWX5 421 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 EGFL7Q9UHF1 273 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 MKLN1Q9UL63 735 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 USP22Q9UPT9 525 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 IFT52Q9Y366 437 aa12.06□□□□□ -0.48
DDX39A-201ENST00000242776 DSPPQ9NZW4 1301 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 CFAP73A6NFT4 308 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 ITGA5P08648 1049 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 CDH2P19022 906 aaPredicted RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 IL2RGP31785 369 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 SUMO3P55854 103 aaPredicted RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 PCBP3P57721 371 aaKnown RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 MERTKQ12866 999 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 TRIM25Q14258 630 aaKnown RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 MAPK11Q15759 364 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 GABRA6Q16445 453 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 FXNQ16595 210 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 LRRC23Q53EV4 343 aaPredicted RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 C3orf33Q6P1S2 294 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 PGM2L1Q6PCE3 622 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 VHLLQ6RSH7 139 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 CCDC80Q76M96 950 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 OLIG3Q7RTU3 272 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 SLC46A3Q7Z3Q1 461 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 MEX3DQ86XN8 651 aaKnown RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 RFLNBQ8N5W9 214 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 WDR31Q8NA23 367 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 FAM156AQ8NDB6 213 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 BHLHE22Q8NFJ8 381 aaPredicted RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 TOR1AIP2Q8NFQ8 470 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 OR5W2Q8NH69 310 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 TAS2R16Q9NYV7 291 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 EMC3Q9P0I2 261 aa12.05□□□□□ -0.48
DDX39A-201ENST00000242776 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
DDX39A-201ENST00000242776 ARPC2O15144 300 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF264O43296 627 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 FCMRO60667 390 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 DBIP07108 87 aaKnown RBP12.04□□□□□ -0.48
DDX39A-201ENST00000242776 UBL4AP11441 157 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 CCNA2P20248 432 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 AQP1P29972 269 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 ATP12AP54707 1039 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 TRAP1Q12931 704 aaKnown RBP12.04□□□□□ -0.48
DDX39A-201ENST00000242776 CBFBQ13951 182 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 LARS2Q15031 903 aaKnown RBP12.04□□□□□ -0.48
DDX39A-201ENST00000242776 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 LIN52Q52LA3 116 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 MTX3Q5HYI7 312 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 PDZK1Q5T2W1 519 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 AP1ARQ63HQ0 302 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 CASP12Q6UXS9 341 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 SSX8Q7RTT4 187 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 CCDC103Q8IW40 242 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 WDR60Q8WVS4 1066 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 POP5Q969H6 163 aaKnown RBP12.04□□□□□ -0.48
DDX39A-201ENST00000242776 LRGUKQ96M69 825 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 ARMC7Q9H6L4 198 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 ACTR3BQ9P1U1 418 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF232Q9UNY5 417 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 DTNAQ9Y4J8 743 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 TENM1Q9UKZ4 2725 aa12.04□□□□□ -0.48
DDX39A-201ENST00000242776 MRPL33O75394 65 aaKnown RBP12.03□□□□□ -0.48
DDX39A-201ENST00000242776 NQO1P15559 274 aaKnown RBP12.03□□□□□ -0.48
DDX39A-201ENST00000242776 IL7RP16871 459 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF23P17027 643 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 RPS4Y1P22090 263 aaKnown RBP12.03□□□□□ -0.48
DDX39A-201ENST00000242776 KDELR2P33947 212 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 SESN3P58005 492 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 SNRPD2P62316 118 aaKnown RBP12.03□□□□□ -0.48
DDX39A-201ENST00000242776 FLOT2Q14254 428 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF141Q15928 474 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF311Q5JNZ3 666 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms