RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Vmn1r219Q8R271 312 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Defb15Q8R2I5 79 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Znf385aQ8VD12 386 aaKnown RBP8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1388Q8VFA3 311 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr123Q8VFQ1 309 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr644Q8VH21 314 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Mrgpra3Q91WW3 302 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Pdzd3Q99MJ6 498 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Arl4dQ99PE9 201 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Fcf1Q9CTH6 198 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Mageb3Q9D2H4 330 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Hcar2Q9EP66 360 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Slc2a8Q9JIF3 477 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Plscr3Q9JIZ9 296 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Orc6Q9WUJ8 262 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Padi1Q9Z185 662 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Kat6aQ8BZ21 2003 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Rasgef1aA0A0N4SVR5 498 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1215A3KGY3 312 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Nlgn4lB0F2B4 945 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1335B2RVY8 335 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr620E9PZ66 313 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Fbxw9F8VPX2 458 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1425K7N659 312 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Sp100O35892 482 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 PrnpP04925 254 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 NdnP25233 325 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Cd69P37217 199 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Sfrp2P97299 295 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Naa11Q3UX61 218 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr464Q5SW48 313 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr8Q60892 310 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Elavl2Q60899 360 aaKnown RBP8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Cpeb3Q7TN99 716 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Rfx4Q7TNK1 735 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr835Q7TRG7 311 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 QarsQ8BML9 775 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Mr1Q8HWB0 341 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1309Q8VF83 320 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gm16286Q9CQX6 220 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Det1Q9D0A0 550 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ociad2Q9D8W7 154 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Rarres2Q9DD06 162 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Vmn1r171Q9EPS6 316 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr959Q9EQ86 311 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Mapk11Q9WUI1 364 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Sept5Q9Z2Q6 369 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ighv1-4A0A075B5T4 117 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ankdd1aA0A1L1ST07 508 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Pex10B1AUE5 324 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gm9772F6XPD8 135 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gm5145F8VQ88 278 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Dhcr7O88455 471 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 F11rO88792 300 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Klk1b4P00757 256 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Oprm1P42866 398 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Dnase2P56542 353 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Hcrtr2P58308 460 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 ThraP63058 492 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Cd84Q18PI6 329 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Mrgprb1Q3UG61 350 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 GalnsQ571E4 520 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1463Q7TQR3 310 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Znf473Q8BI67 892 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Phf11aQ8BVM9 293 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Bcas3Q8CCN5 928 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Vmn1r18Q8R2C8 299 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr736Q8VFT6 312 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr385Q8VGT1 312 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Asb18Q8VHA6 467 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 BaalcQ8VHV1 145 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Tmed9Q99KF1 235 aaKnown RBP8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Pole4Q9CQ36 118 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Psmd8Q9CX56 353 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gje1Q9CX92 205 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ube2fQ9CY34 185 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Klk5Q9D140 293 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Q9D4W2 315 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 RbpmsQ9WVB0 197 aaKnown RBP8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Fam205aA2APU8 1308 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Igsf9bE9PZ19 1328 aa8.26□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gm867A0A1W2P7T4 151 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Pramef25A2ASI9 494 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Vmn2r72D3Z4N8 856 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Zfp983E9PUT0 460 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 ImpactO55091 318 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 P01646 108 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Tcte3P11985 191 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Atp1b2P14231 290 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Nkx2-1P50220 372 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Dnajc30P59041 219 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Rad51Q08297 339 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Rpusd3Q14AI6 344 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Slc38a5Q3U1J0 479 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Kctd1Q5M956 257 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Serpinb1cQ5SV42 375 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Cyp3a16Q64481 504 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ugt2a2Q6PDD0 528 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ugt2a1Q80X89 528 aa8.25□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Susd6Q8BGE4 302 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms