RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Eif3iQ9QZD9 325 aaKnown RBP20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm14744B1AVU4 173 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm45711E0CXA2 391 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Cdh19E9Q3A7 770 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Zfp760E9QAF5 666 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Kcne1P23299 129 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Stfa3P35173 103 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ccr4P51680 360 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Taf1aP97357 453 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ino80cQ8BHA0 191 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 5430402E10RikQ9D3N5 173 aa20.89■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Pde4dipQ80YT7 2224 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Spag17Q5S003 2320 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Lrrc72A0A1Y7VMI0 288 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 PtprhE9Q0N2 971 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Pip5k1cO70161 661 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Pax7P47239 503 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 CckbrP56481 453 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Sox14Q04892 240 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Pde12Q3TIU4 608 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Dcp1bQ3U564 578 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 RalyQ64012 312 aaKnown RBP20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr744Q7TRM0 323 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 2810021J22RikQ8BIB6 539 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Kcnk10Q8BUW1 535 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Lypd4Q8BVP6 246 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 PxkQ8BX57 582 aa20.88■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr544E9PX47 334 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr31E9Q3K2 317 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm16506F7ANP4 213 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 FxnO35943 207 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Copz1P61924 177 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Zfp41Q02526 198 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Tmem253Q3UNB8 204 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr3Q60879 313 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Shisa5Q9D7I0 235 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Il21Q9ES17 146 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Abcb10Q9JI39 715 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm36864A0A1Y7VJE6 447 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr74A2BHP6 318 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr750E9Q0Z1 331 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gpr137cE9Q343 423 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Shisa8J3QNX5 399 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm17174M0QWQ9 212 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 FstP47931 344 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Bcap31Q61335 245 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Fkbp10Q61576 581 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Nox3Q672J9 568 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Cxcl3Q6W5C0 100 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr728Q7TRM6 311 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Zfp184Q7TSH9 737 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Abhd13Q80UX8 337 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Vgll4Q80V24 287 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Supv3l1Q80YD1 779 aaKnown RBP20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gpr68Q8BFQ3 365 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Glt28d2Q8BML3 165 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Acy3Q91XE4 318 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Mbd3l1Q9D9H3 186 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Exosc1Q9DAA6 195 aaKnown RBP20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ethe1Q9DCM0 254 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Nfkb2Q9WTK5 899 aa20.87■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Spin2-ps6A0A140T8V2 174 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm6880A3KG45 208 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Fgf3P05524 245 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Otx2P80206 289 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Commd6Q3V4B5 87 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Sgk494Q5SYL1 278 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 CrhbpQ60571 322 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 BC061237Q6P8I2 184 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Zik1Q80YP6 463 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 LsampQ8BLK3 341 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 FlcnQ8QZS3 579 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Dgat1Q9Z2A7 498 aa20.86■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ighv15-2A0A0A6YX72 118 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Prdm14E9Q3T6 561 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Bglap3P54615 95 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Cadm2Q8BLQ9 435 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Olfr870Q8VGG4 311 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Eif2b2Q99LD9 351 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Rcbtb2Q99LJ7 551 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Uck2Q99PM9 261 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Fam69aQ9D6I7 428 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Izumo2Q9DA16 220 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Q9DAS2 200 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 P2rx4Q9JJX6 388 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ldb3Q9JKS4 723 aaKnown RBP20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 ChmlQ9QZD5 621 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Zfp433A0A0J9YUD4 600 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Gm32687A0A1W2P6H7 600 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Fam46aD3Z5S8 447 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Avpr2O88721 371 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ubl4aP21126 157 aaKnown RBP20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Rab2bP59279 216 aaKnown RBP20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Ccdc177Q3UHB8 706 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Rpa2Q62193 270 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Oog2Q7TPX8 476 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Tas2r135Q7TQA9 312 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Rhbdd3Q8BP97 385 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Clec9aQ8BRU4 238 aa20.85■□□□□ 0.93
Upf3a-201ENSMUST00000043767 Acp7Q8BX37 438 aa20.85■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms