RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SLAMF9Q96A28 289 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 TWSG1Q9GZX9 223 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 PSORS1C1Q9UIG5 152 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 EMC9Q9Y3B6 208 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 HEMK1Q9Y5R4 338 aaPredicted RBP11.86□□□□□ -0.51
SCN8A-209ENST00000627620 BET1O15155 118 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 CDK4P11802 303 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 RAB6AP20340 208 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 HTR2CP28335 458 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 CARD18P57730 90 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 RACK1P63244 317 aaKnown RBP11.86□□□□□ -0.51
SCN8A-209ENST00000627620 MFAP5Q13361 173 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 LTC4SQ16873 150 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 NXPE3Q969Y0 559 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 MRPL38Q96DV4 380 aaKnown RBP11.86□□□□□ -0.51
SCN8A-209ENST00000627620 NRIP3Q9NQ35 241 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 LAMB4A4D0S4 1761 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 A0A1W2PPV4 95 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 ANKRD33BA6NCL7 494 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 SYT5O00445 386 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 SOCS6O14544 535 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 IKZF1Q13422 519 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 MSMO1Q15800 293 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 SLC36A2Q495M3 483 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 MAVSQ7Z434 540 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 FRMD1Q8N878 549 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 PIGQQ9BRB3 760 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 TRAPPC2LQ9UL33 140 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 CHD4Q14839 1912 aa11.86□□□□□ -0.51
SCN8A-209ENST00000627620 TNFRSF10AO00220 468 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 SLC34A2O95436 690 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 ENPP1P22413 925 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 CRMP1Q14194 572 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TATDN3Q17R31 274 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF674Q2M3X9 581 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 RTN4RL1Q86UN2 441 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 RHOXF1Q8NHV9 184 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 PAQR8Q8TEZ7 354 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 PDXPQ96GD0 296 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 NMNAT2Q9BZQ4 307 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 NGBQ9NPG2 151 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 PPP1R14DQ9NXH3 145 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 ATPIF1Q9UII2 106 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 DDAH2O95865 285 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 CHRNB4P30926 498 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 MANEAQ5SRI9 462 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 PARM1Q6UWI2 310 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 LYPD4Q6UWN0 246 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 ESX1Q8N693 406 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 BBS1Q8NFJ9 593 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 OR7G1Q8NGA0 311 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TMEM106AQ96A25 262 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 MCRIP1C9JLW8 97 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 YKT6O15498 198 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 DOK2O60496 412 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 IRS1P35568 1242 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 OR1D5P58170 312 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 Q499Y3 187 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 CLVS2Q5SYC1 327 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 MFSD12Q6NUT3 480 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 DPY19L2P2Q6ZN68 376 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 HRASLS5Q96KN8 279 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 FER1L6-AS2Q96M78 137 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TAS2R16Q9NYV7 291 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 A0A1W2PS29 197 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 CD27P26842 260 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 SSTR2P30874 369 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TSFMP43897 325 aaKnown RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TPMTP51580 245 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 POU4F3Q15319 338 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 HENMT1Q5T8I9 393 aaKnown RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 FAM71E1Q6IPT2 247 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 MARCH3Q86UD3 253 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 LINC00346Q8IVM7 164 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 LILRA2Q8N149 483 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TMEM102Q8N9M5 508 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 OR5D18Q8NGL1 313 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 OR11L1Q8NGX0 322 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 RAB3CQ96E17 227 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 OR2M2Q96R28 347 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 ELF4Q99607 663 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 MBNL1Q9NR56 388 aaKnown RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 COQ3Q9NZJ6 369 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 TMEM184BQ9Y519 407 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 NUP98P52948 1817 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 PRICKLE3O43900 615 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-209ENST00000627620 B3GALT4O96024 378 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 SCG5P05408 212 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 CHATP28329 748 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 HTD2P86397 168 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 BEX5Q5H9J7 111 aa11.85□□□□□ -0.51
SCN8A-209ENST00000627620 HBMQ6B0K9 141 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms