RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TRBV4-1A0A0J9YWV2 114 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 A0A1W2PNV4 684 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 HTR3EA5X5Y0 456 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 ZNF814B7Z6K7 855 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 TNFRSF11BO00300 401 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 DVL2O14641 736 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 FZD7O75084 574 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
PNKP-221ENST00000627317 KRT36O76013 467 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 OR7A10O76100 309 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 CST1P01037 141 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 IGF2P01344 180 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 HIST1H2ABP04908 130 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 IFI30P13284 250 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 ACTR3P61158 418 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 H3F3AP84243 136 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 FOXF2Q12947 444 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 PMS2P3Q13401 168 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 SLC25A35Q3KQZ1 300 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 TMEM201Q5SNT2 666 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 EEF1A1P5Q5VTE0 462 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
PNKP-221ENST00000627317 HIST3H2AQ7L7L0 130 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 CDK20Q8IZL9 346 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 RNF113BQ8IZP6 322 aaKnown RBP13.1□□□□□ -0.31
PNKP-221ENST00000627317 SCAIQ8N9R8 606 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 RELL2Q8NC24 303 aaPredicted RBP13.1□□□□□ -0.31
PNKP-221ENST00000627317 HIST1H2ACQ93077 130 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 BPIFA2Q96DR5 249 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 GP6Q9HCN6 339 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 KCNJ16Q9NPI9 418 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 MRPL39Q9NYK5 338 aaKnown RBP13.1□□□□□ -0.31
PNKP-221ENST00000627317 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 B3GALT5Q9Y2C3 310 aa13.1□□□□□ -0.31
PNKP-221ENST00000627317 SAMHD1Q9Y3Z3 626 aaKnown RBP13.1□□□□□ -0.31
PNKP-221ENST00000627317 GNGT2O14610 69 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 RAMP1O60894 148 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 VAMP5O95183 116 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 OR6A2O95222 327 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
PNKP-221ENST00000627317 BMP5P22003 454 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 AGTR1P30556 359 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 OPRM1P35372 400 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 LTBQ06643 244 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 PDK3Q15120 406 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 SEC23BQ15437 767 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 TBPL2Q6SJ96 375 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 FAM214BQ7L5A3 538 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 SLC46A3Q7Z3Q1 461 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 GPAT4Q86UL3 456 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 DMRTC2Q8IXT2 367 aaPredicted RBP13.09□□□□□ -0.31
PNKP-221ENST00000627317 INTS1Q8N201 2190 aaKnown RBP13.09□□□□□ -0.31
PNKP-221ENST00000627317 PAPD5Q8NDF8 572 aaKnown RBP13.09□□□□□ -0.31
PNKP-221ENST00000627317 ADPRHL1Q8NDY3 354 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 OR4K5Q8NGD3 323 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 SLCO4A1Q96BD0 722 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 C14orf79Q96F83 325 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 ALPK1Q96QP1 1244 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 PSD2Q9BQI7 771 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 C20orf141Q9NUB4 165 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 SEC14L4Q9UDX3 406 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 ZNF629Q9UEG4 869 aaPredicted RBP13.09□□□□□ -0.31
PNKP-221ENST00000627317 LYVE1Q9Y5Y7 322 aa13.09□□□□□ -0.31
PNKP-221ENST00000627317 AKAP9Q99996 3911 aa13.08□□□□□ -0.31
PNKP-221ENST00000627317 ANKHD1Q8IWZ3 2542 aaKnown RBP13.08□□□□□ -0.32
PNKP-221ENST00000627317 IGKV3D-15A0A087WSY6 115 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 SH3PXD2BA1X283 911 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 ZNF716A6NP11 495 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 EEF1E1-BLOC1S5C9J1V9 151 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 GPR171O14626 319 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 EEF1E1O43324 174 aaKnown RBP13.08□□□□□ -0.32
PNKP-221ENST00000627317 OR10H3O60404 316 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 IL18BPO95998 194 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 YES1P07947 543 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 FUT1P19526 365 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 IFNGR2P38484 337 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 GPR4P46093 362 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 P2RY4P51582 365 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 SLC16A1P53985 500 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.321e-11■■■■■ 50.1
PNKP-221ENST00000627317 PRKCDQ05655 676 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 PUDPQ08623 228 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 GUSBP1Q15486 140 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
PNKP-221ENST00000627317 MEX3DQ86XN8 651 aaKnown RBP13.08□□□□□ -0.32
PNKP-221ENST00000627317 TUSC5Q8IXB3 177 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 C10orf67Q8IYJ2 551 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 OR9K2Q8NGE7 335 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 OR6K3Q8NGY3 331 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 FAM46AQ96IP4 442 aaKnown RBP13.08□□□□□ -0.32
PNKP-221ENST00000627317 FUZQ9BT04 418 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 SF3B5Q9BWJ5 86 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms