RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 C1orf61Q13536 156 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 LGALSLQ3ZCW2 172 aaPredicted RBP10.29□□□□□ -0.76
VARS2-213ENST00000625423 FGD2Q7Z6J4 655 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 TAF8Q7Z7C8 310 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 ARHGEF39Q8N4T4 335 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.29□□□□□ -0.76
VARS2-213ENST00000625423 OR11G2Q8NGC1 345 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 ANGPTL6Q8NI99 470 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
VARS2-213ENST00000625423 MRPL48Q96GC5 212 aaKnown RBP10.29□□□□□ -0.76
VARS2-213ENST00000625423 LMF1Q96S06 567 aa10.29□□□□□ -0.76
VARS2-213ENST00000625423 ANKRD61A6NGH8 418 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PDCD5O14737 125 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PEX14O75381 377 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 GLCEO94923 617 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 CRYZL1O95825 349 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 GUSBP08236 651 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PTHLHP12272 177 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 MAOAP21397 527 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 SELENOPP49908 381 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 LINC01590Q5TEZ4 76 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 RFPL4BQ6ZWI9 263 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 HGDQ93099 445 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 DGAT2Q96PD7 388 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 DPCDQ9BVM2 203 aaPredicted RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 OR10A4Q9H209 315 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 EIF3KQ9UBQ5 218 aaKnown RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 V9GY05 133 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 IGKV1D-42A0A075B6H8 117 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 A0A1B0GVI7 797 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PRAMEF2O60811 474 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 OR8G3PP0DMU2 310 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 RNH1P13489 461 aaKnown RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 ZNF81P51508 661 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 ARPC4P59998 168 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 RPS4XP62701 263 aaKnown RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 HHEXQ03014 270 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 ARMC6Q6NXE6 501 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 MCATQ8IVS2 390 aaKnown RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 SLC35F3Q8IY50 421 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PHYHIPQ92561 330 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PRTFDC1Q9NRG1 225 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 RXFP3Q9NSD7 469 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PTTG3PQ9NZH4 202 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 TMEM72A0PK05 275 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 ZNF749O43361 778 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 CTNSO60931 367 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 GPR3P46089 330 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 VEGFCP49767 419 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 PRPS1P60891 318 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 Q6ZTK2 550 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 METTL27Q8N6F8 245 aaPredicted RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 SORCS2Q96PQ0 1159 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 CDCA3Q99618 268 aaPredicted RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 OR10A5Q9H207 317 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 SEMA6CQ9H3T2 930 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 CDCP1Q9H5V8 836 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 METTL17Q9H7H0 456 aaPredicted RBP10.28□□□□□ -0.76
VARS2-213ENST00000625423 DIABLOQ9NR28 239 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 KLHL9Q9P2J3 617 aa10.28□□□□□ -0.76
VARS2-213ENST00000625423 KIR2DS5A0A0G2JLQ3 304 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 A0A0G2JNG1 304 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 KIR2DS3K7RE56 304 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 KHNYNO15037 678 aaKnown RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 KRT33AO76009 404 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 SOX2P48431 317 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 PSMD4P55036 377 aaKnown RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 RPS15P62841 145 aaKnown RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 HSF2Q03933 536 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 KIR2DS5Q14953 304 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 COL28A1Q2UY09 1125 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 ZNF684Q5T5D7 378 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 FAAP20Q6NZ36 180 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 CCDC28AQ8IWP9 274 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 SYNPRQ8TBG9 265 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 RPS4Y2Q8TD47 263 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 HMGB4Q8WW32 186 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 MED30Q96HR3 178 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 MOGAT1Q96PD6 335 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 ZNF436Q9C0F3 470 aaPredicted RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 FKRPQ9H9S5 495 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 PLEKHA1Q9HB21 404 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 OR5V1Q9UGF6 321 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 SCP2D1Q9UJQ7 156 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 POMT2Q9UKY4 750 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 KLHDC2Q9Y2U9 406 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 CLDN16Q9Y5I7 305 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 TICRRQ7Z2Z1 1910 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 ELOA3DA6NLF2 546 aaPredicted RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 GABARAPH6UMI1 98 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 ICMTO60725 284 aa10.27□□□□□ -0.77
VARS2-213ENST00000625423 KHDRBS3O75525 346 aaKnown RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 PSMB1P20618 241 aaKnown RBP10.27□□□□□ -0.77
VARS2-213ENST00000625423 GRK6P43250 576 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms