RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 LCN8Q6JVE9 175 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 NANOGP8Q6NSW7 305 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 NIPAL1Q6NVV3 410 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 ANGPTL8Q6UXH0 198 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 COMMD6Q7Z4G1 85 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CAMKMTQ7Z624 323 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 IFNEQ86WN2 208 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SLC30A8Q8IWU4 369 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SPAG16Q8N0X2 631 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 METTL4Q8N3J2 472 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 C2orf73Q8N5S3 287 aaPredicted RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 RNF148Q8N7C7 305 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 OR4A15Q8NGL6 344 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 OR1J1Q8NGS3 322 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CLHC1Q8NHS4 586 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 ZNRF4Q8WWF5 429 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 PYDC1Q8WXC3 89 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 DNAJC9Q8WXX5 260 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 TSACCQ96A04 125 aaPredicted RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 FAM162AQ96A26 154 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 RERGQ96A58 199 aaPredicted RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 BIRC7Q96CA5 298 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 BMFQ96LC9 184 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CMTM3Q96MX0 182 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 PRAP1Q96NZ9 151 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 GPATCH1Q9BRR8 931 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 DPH7Q9BTV6 452 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 TRPM6Q9BX84 2022 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 UGT2B28Q9BY64 529 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 KLHL4Q9C0H6 718 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 RHBGQ9H310 441 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 XKR8Q9H6D3 395 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 REEP4Q9H6H4 257 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 NANOGQ9H9S0 305 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 C8orf4Q9NR00 106 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 LYARQ9NX58 379 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 ACTR3BQ9P1U1 418 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 APOBEC3BQ9UH17 382 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 BTNL2Q9UIR0 455 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 ANAPC2Q9UJX6 822 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 RPS6KA6Q9UK32 745 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 WDR37Q9Y2I8 494 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 C15orf41Q9Y2V0 281 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 AP4S1Q9Y587 144 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 AP1M2Q9Y6Q5 423 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SPACA6W5XKT8 324 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 NOTCH2Q04721 2471 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 IGLV7-46A0A075B6I9 117 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 A0A0J9YY10 115 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 PRSS51A0A1B0GVH4 220 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 DHRS12A0PJE2 317 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 PRORSD1PA6NEY8 169 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SERINC4A6NH21 518 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SHISA7A6NL88 538 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 NME4O00746 187 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 TXNDC9O14530 226 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ARPC2O15144 300 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SH3BGRLO75368 114 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 KHDRBS3O75525 346 aaKnown RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 IFNA14P01570 189 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 KLK1P06870 262 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 GNSP15586 552 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 FASP25445 335 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 AK4P27144 223 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 PSMB5P28074 263 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 IL12AP29459 219 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 TLX1P31314 330 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 SOAT1P35610 550 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 CHI3L1P36222 383 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 GSK3BP49841 420 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ATXN3P54252 364 aaPredicted RBP4.24□□□□□ -1.73
VPS29-212ENST00000621131 MTPNP58546 118 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 HNRNPKP61978 463 aaKnown RBP eCLIP4.24□□□□□ -1.73
VPS29-212ENST00000621131 CSNK1G2P78368 415 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 CHRNB3Q05901 458 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 KLC1Q07866 573 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 KIAA0040Q15053 153 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SLC5A12Q1EHB4 618 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 SNAI3Q3KNW1 292 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 TOR1AIP1Q5JTV8 583 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 PAGE3Q5JUK9 113 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 GLYATQ6IB77 296 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR4F3Q6IEY1 312 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 IYDQ6PHW0 289 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ZNF621Q6ZSS3 439 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 ABHD13Q7L211 337 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 RABEPKQ7Z6M1 372 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 MICU2Q8IYU8 434 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 KRTCAP2Q8N6L1 136 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 TMEM178AQ8NBL3 297 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 MFSD9Q8NBP5 474 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 CAMKVQ8NCB2 501 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR2L3Q8NG85 312 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR7A2PQ8NGA2 310 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR4E2Q8NGC2 313 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR4K1Q8NGD4 311 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR8J2Q8NGG1 315 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 OR10G6Q8NH81 332 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 C16orf78Q8WTQ4 265 aa4.24□□□□□ -1.73
VPS29-212ENST00000621131 GTF2H4Q92759 462 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms