RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CA10Q9NS85 328 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 A0A1W2PPE2 198 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ICOSLGO75144 302 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 NPBWR1P48145 328 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR6V1Q8N148 313 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR9A2Q8NGT5 310 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CABLES2Q9BTV7 478 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 KLK4Q9Y5K2 254 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SIAH2O43255 324 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SLC14A1Q13336 389 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CTSL3PQ5NE16 218 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR4S1Q8NGB4 309 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR1J2Q8NGS2 313 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 GAREM1Q9H706 876 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 C19orf12Q9NSK7 152 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TMEFF2Q9UIK5 374 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PCOLCE2Q9UKZ9 415 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PEAK1Q9H792 1746 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 UBL3O95164 117 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 HEXAP06865 529 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 AVPR2P30518 371 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 HMGCLP35914 325 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PCBP4P57723 403 aaKnown RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SELENOIQ9C0D9 397 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MIXL1Q9H2W2 232 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 GCM1Q9NP62 436 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TREX1Q9NSU2 369 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SAGE1Q9NXZ1 904 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SLC25A37Q9NYZ2 338 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ERVW-1Q9UQF0 538 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 V9GYH0 126 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 A6NNC1 897 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 LILRB3O75022 631 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 POP4O95707 220 aaKnown RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 HPXP02790 462 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SEC13P55735 322 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 RAB40BQ12829 278 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TIGD5Q53EQ6 642 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OGFOD3Q6PK18 319 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ABHD1Q96SE0 405 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MSRAQ9UJ68 235 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 AMDHD2Q9Y303 409 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 NAP1L6A6NFF2 107 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TSPAN6O43657 245 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 INHBBP09529 407 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 GATMP50440 423 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ELFN2Q5R3F8 820 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SIGLECL1Q8N7X8 197 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR2G3Q8NGZ4 309 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 FAM174AQ8TBP5 190 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 KHSRPQ92945 711 aaKnown RBP eCLIP4.68□□□□□ -1.661e-6■■■□□ 16.4
VPS13D-214ENST00000620676 TMEM169Q96HH4 297 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ST6GALNAC4Q9H4F1 302 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 DUSP21Q9H596 190 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CYB5R3P00387 301 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 RIPPLY3P57055 190 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 H3F3AP84243 136 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CXorf40BQ96DE9 158 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR5V1Q9UGF6 321 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PHYHO14832 338 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SEC14L5O43304 696 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SPINK4O60575 86 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 P2RX1P51575 399 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 DHCR24Q15392 516 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SYPL1Q16563 259 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 COX15Q7KZN9 410 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 COMMD6Q7Z4G1 85 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 KATNBL1Q9H079 304 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ISYNA1Q9NPH2 558 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SEMA4GQ9NTN9 838 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ARL2-SNX15V9GYD0 113 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR8G3PP0DMU2 310 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MSX1P28360 303 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR1D2P34982 312 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 RPL24P83731 157 aaKnown RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TEX26Q8N6G2 289 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 LCN9Q8WX39 176 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 FAM3CQ92520 227 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MRPS24Q96EL2 167 aaKnown RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TSGA13Q96PP4 275 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 GGACTQ9BVM4 153 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 APMAPQ9HDC9 416 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MPIG6BO95866 241 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SMIM6P0DI80 62 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 FCGR2CP31995 323 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SERTAD2Q14140 314 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 IRF4Q15306 451 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CXCL17Q6UXB2 119 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 DBX2Q6ZNG2 339 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MUC20Q8N307 709 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 LILRB2Q8N423 598 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PFN4Q8NHR9 129 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SGCZQ96LD1 299 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SLX1AQ9BQ83 275 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TAS2R8Q9NYW2 309 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CLCF1Q9UBD9 225 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF281Q9Y2X9 895 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 A6NIZ1 184 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms