RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 C1orf198Q9H425 327 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 XKR8Q9H6D3 395 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 KAT8Q9H7Z6 458 aaKnown RBP4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ZC4H2Q9NQZ6 224 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 SLC6A13Q9NSD5 602 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 KLHL13Q9P2N7 655 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 MALT1Q9UDY8 824 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 AP3M1Q9Y2T2 418 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 NINQ8N4C6 2090 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 SMIM30A4D0T7 59 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 SLC28A1O00337 649 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ANGPT2O15123 496 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 NOS1APO75052 506 aaPredicted RBP4.81□□□□□ -1.64
CBWD3-215ENST00000619322 RDH16O75452 317 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 IL6P05231 212 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 KRT8P05787 483 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ALOX5P09917 674 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 IL7RP16871 459 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 HOXB6P17509 224 aaKnown RBP4.81□□□□□ -1.64
CBWD3-215ENST00000619322 DCKP27707 260 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 CCKARP32238 428 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 SOX3P41225 446 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 WNT3P56703 355 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 HSPA14Q0VDF9 509 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 PRKG2Q13237 762 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 TP53BP2Q13625 1128 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ZNF672Q499Z4 452 aaPredicted RBP4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ATP6AP1LQ52LC2 224 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ENPP6Q6UWR7 440 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.81□□□□□ -1.64
CBWD3-215ENST00000619322 C10orf111Q8N326 155 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 IL17RDQ8NFM7 739 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 NDNFQ8TB73 568 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 MED30Q96HR3 178 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 NEDD4LQ96PU5 975 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 IPPKQ9H8X2 491 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 ZNF226Q9NYT6 803 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 VAPAQ9P0L0 249 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 HDGFL3Q9Y3E1 203 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 CHD6Q8TD26 2715 aa4.81□□□□□ -1.64
CBWD3-215ENST00000619322 TRIM77I1YAP6 450 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CLDN9O95484 217 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 ETHE1O95571 254 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 NUDT14O95848 222 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 FPR2P25090 351 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 HSPA7P48741 367 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 PTH2RP49190 550 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 DVL1P1P54792 670 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CLDN8P56748 225 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 KCNK10P57789 538 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 GNG2P59768 71 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 C17orf67Q0P5P2 114 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 MAD2L1Q13257 205 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 KRTAP27-1Q3LI81 207 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 FBXO48Q5FWF7 155 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 GLCCI1Q86VQ1 547 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 TIGD4Q8IY51 512 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 NUP43Q8NFH3 380 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 OR4K14Q8NGD5 310 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 VANGL1Q8TAA9 524 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 ZNF566Q969W8 418 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 SFXN2Q96NB2 322 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 MUS81Q96NY9 551 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 RHNO1Q9BSD3 238 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 C9orf16Q9BUW7 83 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 ADI1Q9BV57 179 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 SPNS1Q9H2V7 528 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 RERGLQ9H628 205 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 MYRFQ9Y2G1 1151 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CSAG2Q9Y5P2 127 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 ATRXP46100 2492 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 SH3D21A4FU49 640 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 KRT87PA6NCN2 255 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 SLC22A1O15245 554 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CT45A8P0DMV1 189 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CT45A9P0DMV2 189 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 PSMB5P28074 263 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 TIA1P31483 386 aaKnown RBP eCLIP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 OR3A3P47888 321 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CRYBA2P53672 197 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 ZP4Q12836 540 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 TOMM20Q15388 145 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 SGCAQ16586 387 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CT45A2Q5DJT8 189 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 KPRPQ5T749 579 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CCBE1Q6UXH8 406 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 LANCL3Q6ZV70 420 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 THAP5Q7Z6K1 395 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CBR4Q8N4T8 237 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 CDRT4Q8N9R6 151 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 SEMA6DQ8NFY4 1073 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 OR8J2Q8NGG1 315 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 KCTD14Q9BQ13 255 aaPredicted RBP4.8□□□□□ -1.64
CBWD3-215ENST00000619322 TUBA1CQ9BQE3 449 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 BTBD2Q9BX70 525 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 OR10A5Q9H207 317 aa4.8□□□□□ -1.64
CBWD3-215ENST00000619322 RNF167Q9H6Y7 350 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms