RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 GM2AP17900 193 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CDKN2CP42773 168 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 TLE4Q04727 773 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PUDPQ08623 228 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PRAMEF9Q5VWM5 478 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PIGTQ969N2 578 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 UCK1Q9HA47 277 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 FOXJ2Q9P0K8 574 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 LIPGQ9Y5X9 500 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CD8B2A6NJW9 211 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 B4DXG7 233 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 RAB3AP20336 220 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 GLRA1P23415 457 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 FCARP24071 287 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 FRKP42685 505 aaPredicted RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 PMP22Q01453 160 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 FAM69AQ5T7M9 428 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 C16orf52Q8NHV5 167 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 BARHL1Q9BZE3 327 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 LGALS13Q9UHV8 139 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 LAMP3Q9UQV4 416 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 FBP2O00757 339 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CLEC3BP05452 202 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PIPP12273 146 aaPredicted RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 APEHP13798 732 aaKnown RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 AMY2BP19961 511 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 FUT4P22083 530 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 TTKP33981 857 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 TRIM23P36406 574 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CCDC92Q53HC0 331 aaPredicted RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 BEX5Q5H9J7 111 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 OR2Z1Q8NG97 314 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 UBASH3BQ8TF42 649 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 TMED9Q9BVK6 235 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 NUDT9Q9BW91 350 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PIGMQ9H3S5 423 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 ABCB9Q9NP78 766 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 POLE3Q9NRF9 147 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 TAAR3PQ9P1P4 343 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CLPTM1O96005 669 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PRKACBP22694 351 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 MAGEA2P43356 314 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PDLIM4P50479 330 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 KLF3P57682 345 aaPredicted RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 SEC61A1P61619 476 aaKnown RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 C3AR1Q16581 482 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CENPNQ96H22 339 aaPredicted RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 SAMD8Q96LT4 415 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 MS4A5Q9H3V2 200 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PTGDR2Q9Y5Y4 395 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 OR2W5A6NFC9 320 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 GSG1Q2KHT4 349 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 PYHIN1Q6K0P9 492 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 LACC1Q8IV20 430 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 ELMOD2Q8IZ81 293 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 LIPHQ8WWY8 451 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 ZFP3Q96NJ6 502 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 CD248Q9HCU0 757 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 IL17BQ9UHF5 180 aa10□□□□□ -0.81
POLR2A-209ENST00000617998 EP300Q09472 2414 aaPredicted RBP10□□□□□ -0.81
POLR2A-209ENST00000617998 PIGBOS1A0A0B4J2F0 54 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 SRD5A2P31213 254 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 MXD1Q05195 221 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 MAL2Q969L2 176 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 RNF170Q96K19 258 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 SDHAF2Q9NX18 166 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 KCNIP3Q9Y2W7 256 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 LOC100509620A0A075B734 347 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 ZCWPW2A0A1B0GU75 182 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 NOS1APO75052 506 aaPredicted RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 DUSP8Q13202 625 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 APOFQ13790 326 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TCEAL1Q15170 157 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 ZNF658BQ4V348 819 aaPredicted RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 XKRXQ6PP77 449 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 ADGRF3Q8IZF5 1079 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 SDR9C7Q8NEX9 313 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TSPEARQ8WU66 669 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 ACPTQ9BZG2 426 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 BCO1Q9HAY6 547 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 MYEF2Q9P2K5 600 aaKnown RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 HDGFL3Q9Y3E1 203 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 LOC101059948A0A1B0GTJ6 334 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TVP23AA6NH52 213 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 RGS9O75916 674 aaPredicted RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 GNB1P62873 340 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 ROR2Q01974 943 aaKnown RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TRIM25Q14258 630 aaKnown RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 RGNQ15493 299 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 CLIP4Q8N3C7 705 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 ZNF321PQ8N8H1 164 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 MCFD2Q8NI22 146 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TM4SF18Q96CE8 201 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TMEM100Q9NV29 134 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 TRBV2A0A0J9YWF9 115 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 C9orf172C9J069 976 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 SMAD9O15198 467 aaKnown RBP9.99□□□□□ -0.81
POLR2A-209ENST00000617998 APOA2P02652 100 aa9.99□□□□□ -0.81
POLR2A-209ENST00000617998 SERPINA5P05154 406 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms