RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR51D1Q8NGF3 324 aa12.56□□□□□ -0.4
PPP4R3B-205ENST00000616288 SUN3Q8TAQ9 357 aa12.56□□□□□ -0.4
PPP4R3B-205ENST00000616288 IL26Q9NPH9 171 aa12.56□□□□□ -0.4
PPP4R3B-205ENST00000616288 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
PPP4R3B-205ENST00000616288 TOGARAM1Q9Y4F4 1720 aa12.56□□□□□ -0.4
PPP4R3B-205ENST00000616288 SPTBP11277 2137 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 GLI3P10071 1580 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 DCDC2BA2VCK2 349 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF623O75123 536 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 IL5P05113 134 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 RNH1P13489 461 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 RPA2P15927 270 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SRMP19623 302 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 CXCL9Q07325 125 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SURF2Q15527 256 aaPredicted RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 AWAT1Q58HT5 328 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 DCAF12L2Q5VW00 463 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 PARGQ86W56 976 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 TAF9BQ9HBM6 251 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 USP36Q9P275 1121 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 POLR1DQ9Y2S0 133 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 NUDT14O95848 222 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 F10P00742 488 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 CR2P20023 1033 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 ATP1B3P54709 279 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 PKIAP61925 76 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 POLR2LP62875 67 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 ACY1Q03154 408 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 RAB11BQ15907 218 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 LRRTM4Q86VH4 590 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SEMA6DQ8NFY4 1073 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR6N2Q8NGY6 317 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 WFIKKN2Q8TEU8 576 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 HCAR1Q9BXC0 346 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC12A9Q9BXP2 914 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 CXorf36Q9H7Y0 433 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 ING1Q9UK53 422 aaPredicted RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 A0A087WUU8 490 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 GREM1O60565 184 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 KNG1P01042 644 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 MMP2P08253 660 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 JMJD7P0C870 316 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 FGF7P21781 194 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC6A6P31641 620 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 P2RX1P51575 399 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 AP1S1P61966 158 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SNRPNP63162 240 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SIRPAP78324 504 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SMAD3P84022 425 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SEC11CQ9BY50 192 aa12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 SRA1Q9HD15 236 aaKnown RBP12.55□□□□□ -0.4
PPP4R3B-205ENST00000616288 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 C7orf77A4D0Y5 90 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TNFSF12O43508 249 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 C5AR1P21730 350 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR1J1Q8NGS3 322 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 SCAMP4Q969E2 229 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TRAV27A0A087WT01 109 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 IGKV6D-21A0A0A0MT36 114 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 A0A1W2PPE2 198 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3BA6NDS4 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 KCNAB3O43448 404 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 LRP3O75074 770 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 PRKRAO75569 313 aaKnown RBP12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 HNF1AP20823 631 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 AVPR2P30518 371 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF385BQ569K4 471 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR56B1Q8NGI3 324 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR5K2Q8NHB8 316 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 PAAF1Q9BRP4 392 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 CHST8Q9H2A9 424 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 TMEM38AQ9H6F2 299 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 LUZP4Q9P127 313 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 LAMP5Q9UJQ1 280 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 KCNK7Q9Y2U2 307 aa12.54□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR6C76A6NM76 312 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms