RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 NEUROD4Q9HD90 331 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 NRIP3Q9NQ35 241 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ACAD8Q9UKU7 415 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TRAV18A0A075B6X5 111 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TMEM202A6NGA9 273 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 SLC22A31A6NKX4 558 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 SFTA3P0C7M3 94 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 VAMP1P23763 118 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ILF3Q12906 894 aaKnown RBP eCLIP9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TXNDC8Q6A555 127 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 GAREM2Q75VX8 874 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZNF784Q8NCA9 323 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 FGF11Q92914 225 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 HIST1H2BAQ96A08 127 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TEAD3Q99594 435 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 LAT2Q9GZY6 243 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 FKRPQ9H9S5 495 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 APMAPQ9HDC9 416 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 WBP1LQ9NX94 342 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 LHX3Q9UBR4 397 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 V9GY05 133 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 A0A1B0GTQ1 180 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TMEM72A0PK05 275 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 IFITM5A6NNB3 132 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 GFYI3L273 518 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 RHOP08100 348 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 MPC1LP0DKB6 136 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 RAB5CP51148 216 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ATP1B3P54709 279 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TBPL1P62380 186 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 CCINQ13939 588 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ODF4Q2M2E3 257 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 CDNFQ49AH0 187 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 CLEC9AQ6UXN8 241 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ARL14EPQ8N8R7 260 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 OR4C6Q8NH72 309 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 GAL3ST3Q96A11 431 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 SULT4A1Q9BR01 284 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TSPAN10Q9H1Z9 355 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 RHOFQ9HBH0 211 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 PPP4R1LQ9P1A2 415 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 METTL1Q9UBP6 276 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 FBXL4Q9UKA2 621 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZNF337Q9Y3M9 751 aa9.55□□□□□ -0.88
TNFAIP3-208ENST00000615468 TRAV14DV4A0A0A6YYC5 116 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 A0A0A6YYC8 382 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 A0A1W2PPH5 198 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 H7C4K7 107 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 I3L1I5 382 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 TMIGD3P0DMS9 266 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 TPT1P13693 172 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 PSMA3P25788 255 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 NTSP30990 170 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 NDUFA6P56556 154 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 AP1S1P61966 158 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 FZD5Q13467 585 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 C11orf87Q6NUJ2 197 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZNF620Q6ZNG0 422 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SLCO4C1Q6ZQN7 724 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 TTLL10Q6ZVT0 673 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 FAM24BQ8N5W8 94 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 VOPP1Q96AW1 172 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SLC25A38Q96DW6 304 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 F2RL3Q96RI0 385 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 CD180Q99467 661 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SUV39H2Q9H5I1 410 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 POLE3Q9NRF9 147 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 MED17Q9NVC6 651 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 UPB1Q9UBR1 384 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 RALGAPA2Q2PPJ7 1873 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 TRAV1-2A0A0B4J238 106 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 TRBV5-4A0A0C4DH59 114 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 BTBD17A6NE02 478 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 AP4M1O00189 453 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 MAS1P04201 325 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 CD3DP04234 171 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SBK2P0C263 348 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 NR2C1P13056 603 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 NT5EP21589 574 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 NME2P22392 152 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 G0S2P27469 103 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 IMPA1P29218 277 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SERPINA4P29622 427 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 AVPR2P30518 371 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 GRPRP30550 384 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 CTNNB1P35222 781 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 RPS15P62841 145 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SKP1P63208 163 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SMAD3P84022 425 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 FAM199XQ6PEV8 388 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 ZG16BQ96DA0 208 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 TRMT61BQ9BVS5 477 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 KRCC1Q9NPI7 259 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 FOXJ3Q9UPW0 622 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 CARHSP1Q9Y2V2 147 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 SERTM1A2A2V5 107 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 NPC1O15118 1278 aa9.54□□□□□ -0.88
TNFAIP3-208ENST00000615468 HLA-AP01891 365 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms