RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ABCA1O95477 2261 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 MXRA5Q9NR99 2828 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 M0R3G1 203 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 PDLIM1O00151 329 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 TRAF3IP2O43734 574 aaPredicted RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 MRPL33O75394 65 aaKnown RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 ANXA11P50995 505 aaKnown RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 ART1P52961 327 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 SEC23BQ15437 767 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 B3GLCTQ6Y288 498 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 Q6ZT83 130 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 GALNT5Q7Z7M9 940 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 DEFB107AQ8IZN7 70 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ZCCHC24Q8N2G6 241 aaKnown RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 STON2Q8WXE9 905 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 GTPBP3Q969Y2 492 aaKnown RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 SLC41A3Q96GZ6 507 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 HSH2DQ96JZ2 352 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF607Q96SK3 696 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 GSX1Q9H4S2 264 aaPredicted RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 HDGFL3Q9Y3E1 203 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 IGKV3D-15A0A087WSY6 115 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 TRAV27A0A087WT01 109 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ENO4A6NNW6 628 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 BLOC1S5-TXNDC5H3BN57 136 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 H7C1C5 153 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 FAAHO00519 579 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF432O94892 652 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 PRSS23O95084 383 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 GPIP06744 558 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 FCGR2AP12318 317 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 CDKN1AP38936 164 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 LCN6P62502 163 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 FMODQ06828 376 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 PIGFQ07326 219 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 ITGADQ13349 1161 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 RNPS1Q15287 305 aaKnown RBP5□□□□□ -1.61
CPNE3-208ENST00000614678 TESK1Q15569 626 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 IQCCQ4KMZ1 466 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 KRT73Q86Y46 540 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 SYT14Q8NB59 555 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 APH1AQ96BI3 265 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 PIGMQ9H3S5 423 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 RPS6KB2Q9UBS0 482 aa5□□□□□ -1.61
CPNE3-208ENST00000614678 SLC35F4A4IF30 521 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GJE1A6NN92 205 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SERPINB7O75635 380 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CCL2P13500 99 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 NQO1P15559 274 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SSTR2P30874 369 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 AQP2P41181 271 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GPR4P46093 362 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CSNK2A1P68400 391 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GNA13Q14344 377 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FBXW9Q5XUX1 488 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ULK3Q6PHR2 472 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CCDC80Q76M96 950 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 BHLHA15Q7RTS1 189 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 AAED1Q7RTV5 226 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TSPEARQ8WU66 669 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 KISS1RQ969F8 398 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ZFP3Q96NJ6 502 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CRLF2Q9HC73 371 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TIGARQ9NQ88 270 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ST6GALNAC2Q9UJ37 374 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 RIMS3Q9UJD0 308 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 LAMP3Q9UQV4 416 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TRAPPC4Q9Y296 219 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 FAM220BPB1ANY3 271 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GPANK1O95872 356 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 IFNGR1P15260 489 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CD53P19397 219 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ATP6V1B2P21281 511 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CRYGSP22914 178 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SLC35A1P78382 337 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GABRA6Q16445 453 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 MSMPQ1L6U9 139 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 OR51A7Q8NH64 312 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CCDC124Q96CT7 223 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PERPQ96FX8 193 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 DACH2Q96NX9 599 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 LRRC37BQ96QE4 947 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF347Q96SE7 839 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF224Q9NZL3 707 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ABCD2Q9UBJ2 740 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 GDF2Q9UK05 429 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 TRBV4-1A0A0J9YWV2 114 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PLPP3O14495 311 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ABCD4O14678 606 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CCDC22O60826 627 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 AHSA1O95433 338 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 IGFBP1P08833 259 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 ADORA3P0DMS8 318 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 PPIBP23284 216 aaKnown RBP4.99□□□□□ -1.61
CPNE3-208ENST00000614678 CDAP32320 146 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 MAGEA8P43361 318 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 NCALDP61601 193 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 SELENOWP63302 87 aa4.99□□□□□ -1.61
CPNE3-208ENST00000614678 DAZAP2Q15038 168 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms