RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 C9orf43Q8TAL5 461 aaPredicted RBP15.75■□□□□ 0.11
SREK1-216ENST00000612404 ERMAPQ96PL5 475 aaPredicted RBP15.75■□□□□ 0.11
SREK1-216ENST00000612404 KATNB1Q9BVA0 655 aa15.75■□□□□ 0.11
SREK1-216ENST00000612404 CHST11Q9NPF2 352 aa15.75■□□□□ 0.11
SREK1-216ENST00000612404 PNPLA3Q9NST1 481 aa15.75■□□□□ 0.11
SREK1-216ENST00000612404 ZNF226Q9NYT6 803 aa15.75■□□□□ 0.11
SREK1-216ENST00000612404 IER3IP1Q9Y5U9 82 aa15.75■□□□□ 0.11
SREK1-216ENST00000612404 TPRP12270 2363 aaKnown RBP15.75■□□□□ 0.11
SREK1-216ENST00000612404 PMS2P2O95744 297 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 HMGN1P05114 100 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 TSPAN19P0C672 248 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 PCYT1AP49585 367 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 SUCLG1P53597 346 aaKnown RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 CTXN1P60606 82 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 CSNK2A1P68400 391 aaPredicted RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 SLC35A1P78382 337 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 PLEKHN1Q494U1 663 aaPredicted RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 UGT2A3Q6UWM9 527 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 GGNQ86UU5 652 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 KDM8Q8N371 416 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 ABTB1Q969K4 478 aaPredicted RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 BSNQ9UPA5 3926 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 TRGV5A0A0B4J1U4 118 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 TLX2O43763 284 aaPredicted RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 PRKYO43930 277 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 GRK5P34947 590 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 FOXK2Q01167 660 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 SRYQ05066 204 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 LINC00303Q3SY05 128 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 HBMQ6B0K9 141 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 ESPNLQ6ZVH7 1005 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 TMEM99Q8N816 258 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 KDF1Q8NAX2 398 aaPredicted RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 RHOXF1Q8NHV9 184 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 NEIL3Q8TAT5 605 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 TAAR6Q96RI8 345 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 POLDIP3Q9BY77 421 aaKnown RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 LHX6Q9UPM6 363 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 BAIAP2Q9UQB8 552 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 B3GALT5Q9Y2C3 310 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 GPR52Q9Y2T5 361 aa15.74■□□□□ 0.11
SREK1-216ENST00000612404 TLN1Q9Y490 2541 aaKnown RBP15.74■□□□□ 0.11
SREK1-216ENST00000612404 SURF4O15260 269 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 SLC2A10O95528 541 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 PLGP00747 810 aaPredicted RBP15.73■□□□□ 0.11
SREK1-216ENST00000612404 EIF1AXP47813 144 aaKnown RBP15.73■□□□□ 0.11
SREK1-216ENST00000612404 CHN2P52757 468 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 CARD18P57730 90 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 PUDPQ08623 228 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 CDK5R2Q13319 367 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 TOP3AQ13472 1001 aaPredicted RBP15.73■□□□□ 0.11
SREK1-216ENST00000612404 LRRC75AQ8NAA5 344 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 OR8J1Q8NGP2 316 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 NR1H4Q96RI1 486 aaPredicted RBP15.73■□□□□ 0.11
SREK1-216ENST00000612404 NRIP3Q9NQ35 241 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 INIPQ9NRY2 104 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 TNFRSF10DQ9UBN6 386 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 MPZL2O60487 215 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 SMNDC1O75940 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
SREK1-216ENST00000612404 CD14P08571 375 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 FMO3P31513 532 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 LHX2P50458 406 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 NADK2Q4G0N4 442 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 ARHGAP11AQ6P4F7 1023 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 CCDC103Q8IW40 242 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 OR2V1Q8NHB1 315 aa15.73■□□□□ 0.11
SREK1-216ENST00000612404 TRUB1Q8WWH5 349 aaKnown RBP15.73■□□□□ 0.11
SREK1-216ENST00000612404 GPX7Q96SL4 187 aaPredicted RBP15.73■□□□□ 0.11
SREK1-216ENST00000612404 NBEAQ8NFP9 2946 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 MS4A18H0YCH9 400 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 MS4A18Q3C1V0 323 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 TMEM225Q6GV28 225 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 PAQR6Q6TCH4 344 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 OR10D3Q8NH80 312 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 FBLIM1Q8WUP2 373 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 APH1BQ8WW43 257 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 OTULINQ96BN8 352 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 SRXN1Q9BYN0 137 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 GRHPRQ9UBQ7 328 aa15.72■□□□□ 0.11
SREK1-216ENST00000612404 IGHV3-15A0A0B4J1V0 119 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 RIIAD1A6NNX1 92 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 ZNF814B7Z6K7 855 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 NPIPA5E9PKD4 350 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 CXCL13O43927 109 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 EIF1BO60739 113 aaKnown RBP15.71■□□□□ 0.11
SREK1-216ENST00000612404 WBP4O75554 376 aaKnown RBP15.71■□□□□ 0.11
SREK1-216ENST00000612404 ACTL6AO96019 429 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 KLK2P20151 261 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 CLDN15P56746 228 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 CLDN18P56856 261 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 SNRPGP62308 76 aaKnown RBP15.71■□□□□ 0.11
SREK1-216ENST00000612404 SMN1Q16637 294 aaKnown RBP15.71■□□□□ 0.11
SREK1-216ENST00000612404 C6orf141Q5SZD1 244 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 PDSS1Q5T2R2 415 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 BCDIN3DQ7Z5W3 292 aaKnown RBP15.71■□□□□ 0.11
SREK1-216ENST00000612404 GPAT4Q86UL3 456 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 MEIOBQ8N635 442 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 TMEM163Q8TC26 289 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 RASD2Q96D21 266 aa15.71■□□□□ 0.11
SREK1-216ENST00000612404 ZHX1-C8orf76Q96EF9 292 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms