RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 F5H5K5 113 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 SPINT1O43278 529 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 NTN1O95631 604 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 CPEP16870 476 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ERP29P30040 261 aaKnown RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 MTNR1BP49286 362 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 FXNQ16595 210 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 OR4Q3Q8NH05 313 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 LGALS14Q8TCE9 139 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ADAMTS14Q8WXS8 1223 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 ZNF350Q9GZX5 532 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ABRACLQ9P1F3 81 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 METTL12A8MUP2 240 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 CREBL2O60519 120 aaPredicted RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 FARS2O95363 451 aaKnown RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 CASP3P42574 277 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 POLR2HP52434 150 aaKnown RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 SPOCK1Q08629 439 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 FAM53BQ14153 422 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 NKAIN1Q4KMZ8 207 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 FCRL6Q6DN72 434 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 TMEM53Q6P2H8 277 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 VASH1Q7L8A9 365 aaPredicted RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 SYT13Q7L8C5 426 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 PM20D2Q8IYS1 436 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 FAM46BQ96A09 425 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ARHGDIGQ99819 225 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 HTR3AP46098 478 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 KCNJ8Q15842 424 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 TMEM176BQ3YBM2 270 aaPredicted RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 OTPQ5XKR4 325 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 GIMAP5Q96F15 307 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 NAA11Q9BSU3 229 aaPredicted RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 METTL8Q9H825 291 aaKnown RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 ISG20L2Q9H9L3 353 aaKnown RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 C20orf141Q9NUB4 165 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 HHLA2Q9UM44 414 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 A0A1W2PQF6 199 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 AMY2AP04746 511 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 SLC2A5P22732 501 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 RBM34P42696 430 aaKnown RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 SRYQ05066 204 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 SRSF5Q13243 272 aaKnown RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 GALEQ14376 348 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 NKPD1Q17RQ9 610 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 TSSK4Q6SA08 328 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 BRIX1Q8TDN6 353 aaKnown RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 ACOXLQ9NUZ1 547 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 RCE1Q9Y256 329 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 CHST2Q9Y4C5 530 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 ZNF236Q9UL36 1845 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 RP1P56715 2156 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 M0R233 179 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 ATP1B1P05026 303 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 GLULP15104 373 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 ITGA3P26006 1051 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 FOLR3P41439 243 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 GPLD1P80108 840 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 AGBL5Q8NDL9 886 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 OR13C5Q8NGS8 318 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 DOK1Q99704 481 aa12.07□□□□□ -0.48
TCF3-220ENST00000611869 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.07□□□□□ -0.486e-7■■■■□ 20.4
TCF3-220ENST00000611869 RANGRFQ9HD47 186 aaPredicted RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 ZNF701Q9NV72 531 aaPredicted RBP12.07□□□□□ -0.48
TCF3-220ENST00000611869 MEGF11A6BM72 1044 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ARPC1BO15143 372 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 POU3F4P49335 361 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 FAM189A2Q15884 450 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 MEP1BQ16820 701 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 RNASE10Q5GAN6 216 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 KCTD20Q7Z5Y7 419 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 OR4M1Q8NGD0 313 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 STT3BQ8TCJ2 826 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 PMM1Q92871 262 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 RBFOX1Q9NWB1 397 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 HMX3A6NHT5 357 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 IDSB3KWA1 339 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 I3L521 148 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 SIGLEC6O43699 453 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 GATBO75879 557 aaKnown RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 HOXC12P31275 282 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 PPICP45877 212 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 FNTBP49356 437 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 GLYR1Q49A26 553 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 FAM27D1Q5T7N8 215 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
TCF3-220ENST00000611869 P4HA3Q7Z4N8 544 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 NOXA1Q86UR1 476 aa12.06□□□□□ -0.48
TCF3-220ENST00000611869 LINC00346Q8IVM7 164 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms