RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SRMP19623 302 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 PGCP20142 388 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 FBLP22087 321 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 S100A1P23297 94 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 MAOBP27338 520 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 MAPK3P27361 379 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TACR3P29371 465 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 IL12BP29460 328 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 OR1D4P47884 311 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CCR4P51679 360 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 STARD6P59095 220 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 MRPS15P82914 257 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 EGR4Q05215 589 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 GPR176Q14439 515 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 UBXN2BQ14CS0 331 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 EBPQ15125 230 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SLC25A35Q3KQZ1 300 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SNAP47Q5SQN1 464 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 NKAIN2Q5VXU1 208 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CBLN3Q6UW01 205 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 FAM220AQ7Z4H9 259 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 PRSS42Q7Z5A4 293 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 NANOGNBQ7Z5D8 188 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CDH24Q86UP0 819 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 NOXA1Q86UR1 476 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 UBE2J2Q8N2K1 259 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 RFLNBQ8N5W9 214 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ZNF321PQ8N8H1 164 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 GATSQ8NAP1 163 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 PLPP5Q8NEB5 264 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 UBASH3BQ8TF42 649 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ZNRF4Q8WWF5 429 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 DNASE2BQ8WZ79 361 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 RNF31Q96EP0 1072 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 MOGAT1Q96PD6 335 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 LMF1Q96S06 567 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ABHD1Q96SE0 405 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ADOQ96SZ5 270 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 LPAR4Q99677 370 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ABCG5Q9H222 651 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 UBE2ZQ9H832 354 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ACOXLQ9NUZ1 547 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ING3Q9NXR8 418 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 COPS7AQ9UBW8 275 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 COPS3Q9UNS2 423 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 KNL1Q8NG31 2342 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TRAV36DV7A0A075B6V5 113 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 A0A1B0GX78 115 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TOX3O15405 576 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ITGA10O75578 1167 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TPPPO94811 219 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 DHFRP00374 187 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 GSTT2P0CG29 244 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 GSTT2BP0CG30 244 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SPTBP11277 2137 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ATF1P18846 271 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CXCR1P25024 350 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ERP29P30040 261 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 BLVRAP53004 296 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 RAG2P55895 527 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 OR1D5P58170 312 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 LTBQ06643 244 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 EGR3Q06889 387 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 RPL18Q07020 188 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 KCNAB1Q14722 419 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CDK10Q15131 360 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SF3B4Q15427 424 aaKnown RBP eCLIP9.5□□□□□ -0.895e-7■■■■■ 28.7
PABPC1-224ENST00000610907 NSDHLQ15738 373 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SMAD2Q15796 467 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 PLA1AQ53H76 456 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 UBE2NLQ5JXB2 153 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TMEM53Q6P2H8 277 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 WDR74Q6RFH5 385 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 C5orf46Q6UWT4 87 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SLC29A4Q7RTT9 530 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CDC20BQ86Y33 519 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TIGD4Q8IY51 512 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 SPEM1Q8N4L4 309 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 LSM14AQ8ND56 463 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 OR1N1Q8NGS0 311 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 OR1L3Q8NH93 324 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 THRSPQ92748 146 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 TSLPQ969D9 159 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 UPRTQ96BW1 309 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CLIP3Q96DZ5 547 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 ADAD1Q96M93 576 aaKnown RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 NUDT9Q9BW91 350 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 NIPAL2Q9H841 368 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 BRD7Q9NPI1 651 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 AKAP7Q9P0M2 348 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-224ENST00000610907 CACNG2Q9Y698 323 aa9.5□□□□□ -0.89
PABPC1-224ENST00000610907 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-224ENST00000610907 A8MU76 341 aa9.49□□□□□ -0.89
PABPC1-224ENST00000610907 A8MUA0 341 aa9.49□□□□□ -0.89
PABPC1-224ENST00000610907 AIPO00170 330 aa9.49□□□□□ -0.89
PABPC1-224ENST00000610907 EEF1E1O43324 174 aaKnown RBP9.49□□□□□ -0.89
PABPC1-224ENST00000610907 HCRTR2O43614 444 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms