RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CORINQ9Y5Q5 1042 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 LCTP09848 1927 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 FXYD6-FXYD2A0A087WZ82 144 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 HPGDSO60760 199 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 CSO75390 466 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 MRPL33O75394 65 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 IGHEP01854 428 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 IGHV4-34P06331 123 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 OR2T7P0C7T2 308 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 SHC1P29353 583 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 ALDH3B2P48448 385 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 P2RX1P51575 399 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 EPHA4P54764 986 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 SLC26A5P58743 744 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 SIRPAP78324 504 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 ATXN7L3Q14CW9 347 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 OCLNQ16625 522 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 NIPAL3Q6P499 406 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 KIRREL2Q6UWL6 708 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 YRDCQ86U90 279 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 KMT5CQ86Y97 462 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 C10orf111Q8N326 155 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 OR2T27Q8NH04 317 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 C7orf34Q96L11 122 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 DCBLD2Q96PD2 775 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 TSSK2Q96PF2 358 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 FXYD6Q9H0Q3 95 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 TTYH1Q9H313 450 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 INPP5EQ9NRR6 644 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 GPATCH2Q9NW75 528 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 SIRT5Q9NXA8 310 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 KLHL13Q9P2N7 655 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 MIA3Q5JRA6 1907 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 DICER1Q9UPY3 1922 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 A0A1W2PPV9 198 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 hCG_1807616A0A1W2PRN6 198 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 EIF4E2O60573 245 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 LILRB5O75023 590 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 MTRF1O75570 445 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 TOXO94900 526 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 CAPZA1P52907 286 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 HCCSP53701 268 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 PCBP4P57723 403 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 PUDPQ08623 228 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 MAB21L1Q13394 359 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 TBRG1Q3YBR2 411 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 AAED1Q7RTV5 226 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 FTMTQ8N4E7 242 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF611Q8N823 705 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 SMAP2Q8WU79 429 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 NUDT9Q9BW91 350 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 ENKD1Q9H0I2 346 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 PCDHB16Q9NRJ7 776 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 CHRNA9Q9UGM1 479 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 CAMK2AQ9UQM7 478 aa6.68□□□□□ -1.34
CSDE1-218ENST00000610726 SPTAN1Q13813 2472 aaKnown RBP6.68□□□□□ -1.34
CSDE1-218ENST00000610726 MEIS3P1A6NDR6 274 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 METTL15A6NJ78 407 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ZAR1LA6NP61 321 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FAM166BA8MTA8 275 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 PATE3B3GLJ2 98 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MAGEB4O15481 346 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SELENOFO60613 162 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FUCA1P04066 466 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SCG5P05408 212 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 HIST1H1CP16403 213 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 STOMP27105 288 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 EPHA8P29322 1005 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 DLSTP36957 453 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GLP1RP43220 463 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 EXT1Q16394 746 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MEP1BQ16820 701 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SYT6Q5T7P8 510 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 TMEM244Q5VVB8 128 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 DHRS13Q6UX07 377 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 C16orf47Q6ZP98 133 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RNF165Q6ZSG1 346 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 BOLLQ8N9W6 283 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SIMC1Q8NDZ2 872 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 GPR32P1Q8NGA4 272 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 TMEM106AQ96A25 262 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 FER1L6-AS2Q96M78 137 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF442Q9H7R0 627 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 TMEM9BQ9NQ34 198 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 V9GY05 133 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 MYO16Q9Y6X6 1858 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 DISC1C4P0D8 188 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 IGHV3-9P01782 118 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ATP1B1P05026 303 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CD3GP09693 182 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 CLEC2LP0C7M8 214 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 BMP4P12644 408 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 IFNGR1P15260 489 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 NPR2P20594 1047 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 SNRPGP62308 76 aaKnown RBP6.67□□□□□ -1.34
CSDE1-218ENST00000610726 RNF4P78317 190 aa6.67□□□□□ -1.34
CSDE1-218ENST00000610726 ADPRMQ3LIE5 342 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms