RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 TTC3P53804 2025 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 SERPINA2P20848 420 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 DLX5P56178 289 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 OR1D5P58170 312 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 PPP2CBP62714 309 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 PPP2CAP67775 309 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 MISPQ8IVT2 679 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 RIMKLAQ8IXN7 391 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 ZNF566Q969W8 418 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 C19orf43Q9BQ61 176 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 COL4A1P02462 1669 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 FGF17O60258 216 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 IFNA2P01563 188 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 OR8U9P0C7N5 309 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 CD1CP29017 333 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 HSD17B7P56937 341 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 C17orf67Q0P5P2 114 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 TMEM201Q5SNT2 666 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 OR7G2Q8NG99 324 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 SGCZQ96LD1 299 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 CCNL2Q96S94 520 aaPredicted RBP13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 ENKD1Q9H0I2 346 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 C1orf198Q9H425 327 aa13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 RANGRFQ9HD47 186 aaPredicted RBP13.17□□□□□ -0.3
PCDHB16-201ENST00000609684 DOCK1Q14185 1865 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 TRDV1A0A1B0GX56 115 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 SMCO3A2RU48 225 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 SSX5O60225 188 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CD63P08962 238 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 GAAP10253 952 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 BSGP35613 385 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CNN3Q15417 329 aaKnown RBP13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 MARCH3Q86UD3 253 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CMIPQ8IY22 773 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 EDAQ92838 391 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 NTNG1Q9Y2I2 539 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 G3V3Y1 287 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 DBHP09172 617 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 MSX1P28360 303 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 GDNFP39905 211 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CASP3P42574 277 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CAMLGP49069 296 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 GP2P55259 537 aaKnown RBP13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC7A5P1Q8MH63 180 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 PRR18Q8N4B5 295 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 Q96M85 177 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 OR2M2Q96R28 347 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 NOX4Q9NPH5 578 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 RBFOX1Q9NWB1 397 aaKnown RBP13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 FCMRO60667 390 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CAV2P51636 162 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 CLDN17P56750 224 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 C14orf28Q4W4Y0 310 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 TMEM179BQ7Z7N9 219 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 LRRC18Q8N456 261 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 BPIFB2Q8N4F0 458 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 NANOGP1Q8N7R0 232 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 GIMAP1Q8WWP7 306 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 ZBTB8AQ96BR9 441 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
PCDHB16-201ENST00000609684 ZNF749O43361 778 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 DOK2O60496 412 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 RPS19P39019 145 aaKnown RBP13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 GK2Q14410 553 aaPredicted RBP13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 C9orf135Q5VTT2 229 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 LCN10Q6JVE6 187 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 ESPNLQ6ZVH7 1005 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 PIGBOS1A0A0B4J2F0 54 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 BIDP55957 195 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 MLC1Q15049 377 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 ARHGAP11BQ3KRB8 267 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 DHRS4L2Q6PKH6 230 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 RAB11FIP2Q7L804 512 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 OR56B4Q8NH76 319 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 WASH6PQ9NQA3 447 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 RAC2P15153 192 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 SSTR2P30874 369 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 EPHA4P54764 986 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 MEP1BQ16820 701 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 SOWAHCQ53LP3 525 aaPredicted RBP13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 LINC00346Q8IVM7 164 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 CMTM1Q8IZ96 169 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 OR1J4Q8NGS1 313 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 RNF167Q9H6Y7 350 aa13.15□□□□□ -0.3
PCDHB16-201ENST00000609684 ZFP57Q9NU63 452 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms