RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GSTK1Q9Y2Q3 226 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 HES2Q9Y543 173 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 A0A096LPK6 155 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 FAM95CA0A1B0GW59 222 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 TCRBV21S2A2A0A5A6 115 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 CTDSPLO15194 276 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 SURF4O15260 269 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 DDNO94850 711 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 RHOP08100 348 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 PAX1P15863 534 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 NFYAP23511 347 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 SLC6A1P30531 599 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 SDC2P34741 201 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 OR1D2P34982 312 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 OR4D2P58180 307 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 SEC61GP60059 68 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 SLC7A9P82251 487 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 MRPS10P82664 201 aaKnown RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 IRF9Q00978 393 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 HNRNPA0Q13151 305 aaKnown RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 RAB32Q13637 225 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 FAHD2BQ6P2I3 314 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF613Q6PF04 617 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 GSG1LQ6UXU4 331 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 RELL2Q8NC24 303 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 OR2G2Q8NGZ5 317 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 CDS1Q92903 461 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 HIST1H2BAQ96A08 127 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 FAHD2AQ96GK7 314 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 THOC3Q96J01 351 aaKnown RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 MSLNLQ96KJ4 702 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 GPR78Q96P69 363 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 F2RL3Q96RI0 385 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 ADAM2Q99965 735 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 UTP23Q9BRU9 249 aaKnown RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 CHIAQ9BZP6 476 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 CHST5Q9GZS9 411 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 PIGMQ9H3S5 423 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 WSB2Q9NYS7 404 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF629Q9UEG4 869 aaPredicted RBP4.34□□□□□ -1.71
LINC01109-201ENST00000603837 IL17BQ9UHF5 180 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 PSORS1C1Q9UIG5 152 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 TRPM7Q96QT4 1865 aa4.34□□□□□ -1.71
LINC01109-201ENST00000603837 GLTPD2A6NH11 291 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 MCRIP1C9JLW8 97 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 WNT10BO00744 389 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ADAM10O14672 748 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TCF21O43680 179 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 OR2T1O43869 369 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ATP6AP2O75787 350 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 RCBTB2O95199 551 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 F10P00742 488 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 IGF2P01344 180 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 PNMTP11086 282 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 UNGP13051 313 aaPredicted RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF35P13682 527 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ABOP16442 354 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 HLA-GP17693 338 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 GPX3P22352 226 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 NFYBP25208 207 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 MST1P26927 711 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TEAD1P28347 426 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 MPLP40238 635 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 NAA10P41227 235 aaPredicted RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 CRISP3P54108 245 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 JAG1P78504 1218 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 SP3Q02447 781 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TTLL4Q14679 1199 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 KHDC1LQ5JSQ8 128 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF648Q5T619 568 aaPredicted RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 CNIH2Q6PI25 160 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TSSK4Q6SA08 328 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TMUB2Q71RG4 321 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM179BQ7Z7N9 219 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TSPAN33Q86UF1 283 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 OR13C5Q8NGS8 318 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM186Q96B77 213 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 MGLLQ99685 303 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM47Q9BQJ4 181 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 MESP1Q9BRJ9 268 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 FUZQ9BT04 418 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF350Q9GZX5 532 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ARL6Q9H0F7 186 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 C7orf69Q9H7B7 122 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 FN3KRPQ9HA64 309 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 SMCO4Q9NRQ5 59 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ACSS1Q9NUB1 689 aaPredicted RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 RNF181Q9P0P0 153 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 CRLS1Q9UJA2 301 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF490Q9ULM2 529 aaPredicted RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 PPP1R3CQ9UQK1 317 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 CARHSP1Q9Y2V2 147 aaKnown RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 YARS2Q9Y2Z4 477 aaKnown RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 NPTNQ9Y639 398 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 OAS3Q9Y6K5 1087 aaKnown RBP4.34□□□□□ -1.72
LINC01109-201ENST00000603837 SMCHD1A6NHR9 2005 aa4.34□□□□□ -1.72
LINC01109-201ENST00000603837 PTPRJQ12913 1337 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 TBC1D3KA0A087X1G2 549 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms