RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 LOC102723996A0A087X1L8 192 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 MAGEB3O15480 346 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 CELA2AP08217 269 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 CYC1P08574 325 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 NAA10P41227 235 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 DIO1P49895 249 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 OR12D2P58182 307 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 GGTLC2Q14390 218 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF517Q6ZMY9 492 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 GRINAQ7Z429 371 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 MISPQ8IVT2 679 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 GALNT6Q8NCL4 622 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 C4orf36Q96KX1 117 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 TTTY10Q9BZA0 68 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 OR11A1Q9GZK7 315 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 MED11Q9P086 117 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 B3GALT1Q9Y5Z6 326 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 TRDV1A0A1B0GX56 115 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 DVL2O14641 736 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC25A12O75746 678 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 NAGAP17050 411 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 FGF9P31371 208 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 SDC2P34741 201 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 BDH1Q02338 343 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 C17orf67Q0P5P2 114 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 POU4F2Q12837 409 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 PON3Q15166 354 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 BTBD16Q32M84 506 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 OR10G3Q8NGC4 313 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 ELP5Q8TE02 316 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC25A36Q96CQ1 311 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 KCTD7Q96MP8 289 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 TSSK2Q96PF2 358 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 TSPAN32Q96QS1 320 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 TAS2R5Q9NYW4 299 aa15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF346Q9UL40 294 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 CNOT1A5YKK6 2376 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-216ENST00000598201 SMIM30A4D0T7 59 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 PMS2P1A4D2B8 440 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 FAM171A2A8MVW0 826 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 J3QLW9 94 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 MAGEB4O15481 346 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 SULT1C4O75897 302 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 HIST1H2ABP04908 130 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 APEHP13798 732 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF19P17023 458 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 SDHAP31040 664 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 RORCP51449 518 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 CLDN6P56747 220 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 DHRS13Q6UX07 377 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 Q6ZNX1 250 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 HIST3H2AQ7L7L0 130 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 HIST1H2ACQ93077 130 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC25A46Q96AG3 418 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 CNN2Q99439 309 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 DEFB126Q9BYW3 111 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 SIAEQ9HAT2 523 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 RPRD1BQ9NQG5 326 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 GALNT8Q9NY28 637 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC6A5Q9Y345 797 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 PEX16Q9Y5Y5 336 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 A0A075B6Q4 140 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 IGHV1-45A0A0A0MS14 117 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 ANKUB1A6NFN9 424 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 GABRPO00591 440 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 RNF13O43567 381 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 SELENOFO60613 162 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 DKK1O94907 266 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 TXNDC12O95881 172 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 IL1AP01583 271 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 MT-ND5P03915 603 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 PRKCAP17252 672 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 CCKBRP32239 447 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 PYCR1P32322 319 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 S100A5P33763 92 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 PTGDSP41222 190 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 PPP5CP53041 499 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 MESTQ5EB52 335 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 LINC01590Q5TEZ4 76 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 ARSKQ6UWY0 536 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 RPTNQ6XPR3 784 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 TMEM91Q6ZNR0 172 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 JAZF1Q86VZ6 243 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 EXD3Q8N9H8 876 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 OR6K6Q8NGW6 343 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 OR5J2Q8NH18 312 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 TTC9Q92623 222 aa15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 CCDC86Q9H6F5 360 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-216ENST00000598201 CD8B2A6NJW9 211 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 A8MVM7 634 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 C9J4A7 227 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 H7C1C5 153 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 CD8BP10966 210 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 LCN6P62502 163 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 ACTC1P68032 377 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 ACTA1P68133 377 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 INSM1Q01101 510 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 LGALS3BPQ08380 585 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 LCN1P1Q5VSP4 162 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 C1orf140Q5VVS0 124 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms