RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 VANGL1Q8TAA9 524 aaPredicted RBP19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 RNF217Q8TC41 542 aa19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 RCN3Q96D15 328 aa19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 SLC41A3Q96GZ6 507 aa19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 OXGR1Q96P68 337 aa19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 SELENONQ9NZV5 590 aa19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 B3GALT5Q9Y2C3 310 aa19.6■□□□□ 0.73
GTF2F1-204ENST00000594965 CPSF4LA6NMK7 179 aaKnown RBP19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 MS4A18H0YCH9 400 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 SMPD2O60906 423 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 ZNF432O94892 652 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 GTF2E2P29084 291 aaKnown RBP19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 SLC25A3Q00325 362 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 VEZF1Q14119 521 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 MS4A18Q3C1V0 323 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 SWT1Q5T5J6 900 aaKnown RBP19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 NIPAL3Q6P499 406 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 H1FNTQ75WM6 255 aaPredicted RBP19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 C1orf162Q8NEQ5 155 aaPredicted RBP19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 RP9Q8TA86 221 aaKnown RBP19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 MOGAT1Q96PD6 335 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 TMEM43Q9BTV4 400 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 DLL4Q9NR61 685 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 GID8Q9NWU2 228 aa19.59■□□□□ 0.73
GTF2F1-204ENST00000594965 SHISA9B4DS77 424 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 LRRN3E7EW58 273 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 CHP2O43745 196 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 UPK3AO75631 287 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 HPRP00739 348 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 CLDN17P56750 224 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 ZNF672Q499Z4 452 aaPredicted RBP19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 TREML1Q86YW5 311 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 ADPRHL1Q8NDY3 354 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 SLC26A7Q8TE54 656 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 ADAMTS16Q8TE57 1224 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 EPYCQ99645 322 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 PCDHAC1Q9H158 963 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 SLC17A5Q9NRA2 495 aa19.58■□□□□ 0.72
GTF2F1-204ENST00000594965 LOC102725191A0A1B0GVB3 256 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 FAM220BPB1ANY3 271 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 DANCRP0C864 163 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 COX4I1P13073 169 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 ZNF43P17038 809 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 SEC24CP53992 1094 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 SHEQ5VZ18 495 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 ERICH5Q6P6B1 374 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 C17orf78Q8N4C9 275 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 RASSF5Q8WWW0 418 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 BOD1Q96IK1 185 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 LINC00470Q9BZP3 86 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 CMTM6Q9NX76 183 aa19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 GMPR2Q9P2T1 348 aaKnown RBP19.57■□□□□ 0.72
GTF2F1-204ENST00000594965 ABCD4O14678 606 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 TRAF3IP2O43734 574 aaPredicted RBP19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 PAX1P15863 534 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 TNFRSF1BP20333 461 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 ZNF83P51522 516 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 TGFBR3Q03167 851 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 MFSD13AQ14CX5 517 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 NHLRC1Q6VVB1 395 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 SCAIQ8N9R8 606 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 FBXW5Q969U6 566 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 PERPQ96FX8 193 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 ALKBH3Q96Q83 286 aaPredicted RBP19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 C1QTNF6Q9BXI9 259 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 GSX2Q9BZM3 304 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 LAMP3Q9UQV4 416 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 RCE1Q9Y256 329 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 CORINQ9Y5Q5 1042 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 ALPK2Q86TB3 2170 aa19.56■□□□□ 0.72
GTF2F1-204ENST00000594965 CCDC22O60826 627 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 SOD3P08294 240 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 HLA-DOBP13765 273 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 CDH2P19022 906 aaPredicted RBP19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 PTH2RP49190 550 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 SPOCK1Q08629 439 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 PGGHGQ32M88 737 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 Q5PR19 223 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 CARM1Q86X55 608 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 SLC15A3Q8IY34 581 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 OR1K1Q8NGR3 316 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 TMEM171Q8WVE6 324 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 ELAC2Q9BQ52 826 aaKnown RBP19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 PRSS27Q9BQR3 290 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 ZNF426Q9BUY5 554 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 MRPL39Q9NYK5 338 aaKnown RBP19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 SLC7A7Q9UM01 511 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 AMDHD2Q9Y303 409 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 SH3GLB1Q9Y371 365 aa19.55■□□□□ 0.72
GTF2F1-204ENST00000594965 MAP1AP78559 2803 aaPredicted RBP19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 TRAPPC13A5PLN9 417 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 OR6C65A6NJZ3 312 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 ZNF587BE7ETH6 402 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 KRT33AO76009 404 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 CD40P25942 277 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 HIKESHIQ53FT3 197 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 C8orf82Q6P1X6 216 aaPredicted RBP19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 SPATA21Q7Z572 469 aa19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 ABHD12BQ7Z5M8 362 aaPredicted RBP19.54■□□□□ 0.72
GTF2F1-204ENST00000594965 WDFY1Q8IWB7 410 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms