RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ATP1B1P05026 303 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 ZNF806P0C7X5 589 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 MYF5P13349 255 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 SPI1P17947 270 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 RBMS1P29558 406 aaKnown RBP14.11□□□□□ -0.15
PNKP-204ENST00000594661 KCNJ3P48549 501 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 WNT4P56705 351 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 OR1D5P58170 312 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 FHL5Q5TD97 284 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 PYHIN1Q6K0P9 492 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 CASP12Q6UXS9 341 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 OR5M3Q8NGP4 307 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 ANKRD9Q96BM1 317 aaPredicted RBP14.11□□□□□ -0.15
PNKP-204ENST00000594661 TSSK6Q9BXA6 273 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 ANKRD19PQ9H560 264 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 RERGLQ9H628 205 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 NIT2Q9NQR4 276 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 PTGFRNQ9P2B2 879 aa14.11□□□□□ -0.15
PNKP-204ENST00000594661 A0A1B0GW55 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 ZNF593O00488 134 aaPredicted RBP14.1□□□□□ -0.15
PNKP-204ENST00000594661 FRS3O43559 492 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 RAB36O95755 333 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 TFP02787 698 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4L2P0CJ85 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4L3P0CJ86 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4L4P0CJ87 422 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4L5P0CJ88 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4L6P0CJ89 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4L7P0CJ90 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 GIMD1P0DJR0 217 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 SPP1P10451 314 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 PPP3CBP16298 524 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 PVALBP20472 110 aaPredicted RBP14.1□□□□□ -0.15
PNKP-204ENST00000594661 MMP11P24347 488 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 S100A11P31949 105 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 ETV5P41161 510 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 STX4Q12846 297 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 GK2Q14410 553 aaPredicted RBP14.1□□□□□ -0.15
PNKP-204ENST00000594661 OCLNQ16625 522 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 CDC73Q6P1J9 531 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 HAGHLQ6PII5 290 aaPredicted RBP14.1□□□□□ -0.15
PNKP-204ENST00000594661 LRRC28Q86X40 367 aaPredicted RBP14.1□□□□□ -0.15
PNKP-204ENST00000594661 SLC35F3Q8IY50 421 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 ZNF527Q8NB42 609 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 OR56B4Q8NH76 319 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 CDS1Q92903 461 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 ZNF285Q96NJ3 590 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 CACNG6Q9BXT2 260 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 PIPOXQ9P0Z9 390 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUX4Q9UBX2 424 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 MIOXQ9UGB7 285 aa14.1□□□□□ -0.15
PNKP-204ENST00000594661 DUXAA6NLW8 204 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SYT5O00445 386 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SIGLEC5O15389 551 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SUSD5O60279 629 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 ATG12O94817 140 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SOX30O94993 753 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 HPXP02790 462 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 FBP1P09467 338 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 CT62P0C5K7 136 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 ACP2P11117 423 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 NT5EP21589 574 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 GIFP27352 417 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 VEGFCP49767 419 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 NR0B1P51843 470 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 PDX1P52945 283 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 TAS2R41P59536 307 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.151e-11■■■■■ 50.1
PNKP-204ENST00000594661 MAT1AQ00266 395 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 SIGLEC14Q08ET2 396 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SHBQ15464 509 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 C12orf73Q69YU5 71 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 LYPD4Q6UWN0 246 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 PGAP1Q75T13 922 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 STX12Q86Y82 276 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 LINC00471Q8N535 108 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 MORN4Q8NDC4 146 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 BEST4Q8NFU0 473 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 OR52I1Q8NGK6 324 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 GAL3ST1Q99999 423 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 CMSS1Q9BQ75 279 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 SPRTNQ9H040 489 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 SAP130Q9H0E3 1048 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 ADAP2Q9NPF8 381 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 EXOSC3Q9NQT5 275 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 NPDC1Q9NQX5 325 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 SLC22A11Q9NSA0 550 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 C19orf53Q9UNZ5 99 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 GPR55Q9Y2T6 319 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 EEF1E1O43324 174 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 FCMRO60667 390 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 NCR1O76036 304 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 GIPP09681 153 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 DHPSP49366 369 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 MGAT2Q10469 447 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SNTB1Q13884 538 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 KCNAB1Q14722 419 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 DUSP5Q16690 384 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 PRICKLE4Q2TBC4 344 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms