RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 OR5H1A6NKK0 313 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF814B7Z6K7 855 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SULT2B1O00204 365 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 FKBP6O75344 327 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 NTN1O95631 604 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 FAM157CP0CG43 387 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 UMPSP11172 480 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 PGCP20142 388 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 UQCRC2P22695 453 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SHC1P29353 583 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 APOBEC1P41238 236 aaKnown RBP8.32□□□□□ -1.08
BRCA1-226ENST00000591534 RIPK1Q13546 671 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 PDK3Q15120 406 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SPANXN4Q5MJ08 99 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 C1orf146Q5VVC0 180 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 FBXW9Q5XUX1 488 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SLC22A25Q6T423 547 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 CBLN3Q6UW01 205 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 DNM1P46Q6ZS02 220 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 FKBP9P1Q75LS8 142 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 EIF3MQ7L2H7 374 aaKnown RBP8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SERPINA11Q86U17 422 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 FUNDC1Q8IVP5 155 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 POU5F2Q8N7G0 328 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 PSMA8Q8TAA3 256 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 RASSF5Q8WWW0 418 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 PMM1Q92871 262 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 APH1AQ96BI3 265 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SLC7A6OSQ96CW6 309 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-226ENST00000591534 TNFRSF13CQ96RJ3 184 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 CDRT15Q96T59 188 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 DHRS9Q9BPW9 319 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 KLHDC3Q9BQ90 382 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 SPATA5L1Q9BVQ7 753 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 LAT2Q9GZY6 243 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 VCX3BQ9H321 246 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 COQ10BQ9H8M1 238 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 FKRPQ9H9S5 495 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 CBLN4Q9NTU7 201 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 EXD2Q9NVH0 621 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 PARPBPQ9NWS1 579 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 TMEM160Q9NX00 188 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 CALML5Q9NZT1 146 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 ABCD2Q9UBJ2 740 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 B3GALT5Q9Y2C3 310 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 NOSIPQ9Y314 301 aaKnown RBP8.32□□□□□ -1.08
BRCA1-226ENST00000591534 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
BRCA1-226ENST00000591534 RAI1Q7Z5J4 1906 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 IGHV3-15A0A0B4J1V0 119 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 SERINC4A6NH21 518 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 SHISA9B4DS77 424 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ETV2O00321 342 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 GSTA4O15217 222 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 DNPH1O43598 174 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 EFNA2O43921 213 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 MRPL33O75394 65 aaKnown RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 STX11O75558 287 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CYP7B1O75881 506 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 PGM3O95394 542 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CSTAP01040 98 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CD8AP01732 235 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 C1QCP02747 245 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 COX5AP20674 150 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 TTKP33981 857 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CHI3L1P36222 383 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CLK1P49759 484 aaKnown RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 DIO1P49895 249 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 FABP6P51161 128 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 NME5P56597 212 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 TGFBR3Q03167 851 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 LOXL1Q08397 574 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 MERTKQ12866 999 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 TRIM25Q14258 630 aaKnown RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 NKPD1Q17RQ9 610 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ZSWIM7Q19AV6 140 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 SYT14P1Q58G82 188 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 C6orf52Q5T4I8 152 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ATAD3BQ5T9A4 648 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF544Q6NX49 715 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ZNF621Q6ZSS3 439 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 TMPPEQ6ZT21 453 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 C16orf62Q7Z3J2 963 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CLEC4FQ8N1N0 589 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 MUC15Q8N387 334 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 BHLHE22Q8NFJ8 381 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 OR4A15Q8NGL6 344 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 OR9I1Q8NGQ6 314 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 PIGXQ8TBF5 258 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 FAM168AQ92567 244 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 GTF2H4Q92759 462 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 PROX1Q92786 737 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 NEUROG1Q92886 237 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CLUHP3Q96NS8 147 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 ANKRD27Q96NW4 1050 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 KCTD14Q9BQ13 255 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CACNG6Q9BXT2 260 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 SHARPINQ9H0F6 387 aa8.31□□□□□ -1.08
BRCA1-226ENST00000591534 CXorf36Q9H7Y0 433 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms