RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 OR2T29Q8NH02 315 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 OR5J2Q8NH18 312 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 SLCO4A1Q96BD0 722 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 ZNF775Q96BV0 537 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-214ENST00000590556 STARD4Q96DR4 205 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 BPIFA2Q96DR5 249 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 ALPK1Q96QP1 1244 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 FUZQ9BT04 418 aa17.04■□□□□ 0.32
DDX39A-214ENST00000590556 SF3B5Q9BWJ5 86 aaKnown RBP17.04■□□□□ 0.32
DDX39A-214ENST00000590556 SH3PXD2BA1X283 911 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 FAM90A27PA6NNH2 459 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 TNFRSF11BO00300 401 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 CST1P01037 141 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 IL1RL1Q01638 556 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 CDSNQ15517 529 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 EXOC3L2Q2M3D2 409 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 GALNT5Q7Z7M9 940 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 KDM8Q8N371 416 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 RELL2Q8NC24 303 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-214ENST00000590556 OR4K5Q8NGD3 323 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 OR9K2Q8NGE7 335 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 OR6K3Q8NGY3 331 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 UCK2Q9BZX2 261 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 PIGMQ9H3S5 423 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 REEP1Q9H902 201 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 KRCC1Q9NPI7 259 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-214ENST00000590556 TMEM5Q9Y2B1 443 aa17.03■□□□□ 0.32
DDX39A-214ENST00000590556 PLPP3O14495 311 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 GNGT2O14610 69 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 SMNDC1O75940 238 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX39A-214ENST00000590556 OR6A2O95222 327 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 ASAH2BP0C7U1 165 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 MAKP20794 623 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 HMGA2P52926 109 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 ACTR3P61158 418 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 KPNB1Q14974 876 aaKnown RBP17.02■□□□□ 0.32
DDX39A-214ENST00000590556 NUFIP2Q7Z417 695 aaKnown RBP17.02■□□□□ 0.32
DDX39A-214ENST00000590556 NANOGNBQ7Z5D8 188 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 MEX3DQ86XN8 651 aaKnown RBP17.02■□□□□ 0.32
DDX39A-214ENST00000590556 LIPHQ8WWY8 451 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 OXGR1Q96P68 337 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 C12orf49Q9H741 205 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 KCNJ16Q9NPI9 418 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 PROCRQ9UNN8 238 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 SAMHD1Q9Y3Z3 626 aaKnown RBP17.02■□□□□ 0.32
DDX39A-214ENST00000590556 FLVCR1Q9Y5Y0 555 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 LYVE1Q9Y5Y7 322 aa17.02■□□□□ 0.32
DDX39A-214ENST00000590556 EFCAB9A8MZ26 197 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 EEF1E1-BLOC1S5C9J1V9 151 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 MS4A18H0YCH9 400 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 EEF1E1O43324 174 aaKnown RBP17.01■□□□□ 0.31
DDX39A-214ENST00000590556 ADORA3P0DMS8 318 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 SAGP10523 405 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-214ENST00000590556 GPR4P46093 362 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 LIMS1P48059 325 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 PUDPQ08623 228 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 C1DQ13901 141 aaKnown RBP17.01■□□□□ 0.31
DDX39A-214ENST00000590556 POU4F3Q15319 338 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 MS4A18Q3C1V0 323 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 DUS3LQ96G46 650 aaKnown RBP17.01■□□□□ 0.31
DDX39A-214ENST00000590556 FAM46AQ96IP4 442 aaKnown RBP17.01■□□□□ 0.31
DDX39A-214ENST00000590556 PLSCR4Q9NRQ2 329 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 VNN3Q9NY84 501 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 NOSIPQ9Y314 301 aaKnown RBP17.01■□□□□ 0.31
DDX39A-214ENST00000590556 AP4S1Q9Y587 144 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 CACNA1CQ13936 2221 aa17.01■□□□□ 0.31
DDX39A-214ENST00000590556 LOC102725191A0A1B0GVB3 256 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 NKX2-6A6NCS4 301 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 ERICH4A6NGS2 130 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 BLOC1S5-TXNDC5H3BN57 136 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 OR10H3O60404 316 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 TIPRLO75663 272 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 HPRP00739 348 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 CGAP01215 116 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 CD8BP10966 210 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 ZNF43P17038 809 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 AHCYP23526 432 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 IFNGR2P38484 337 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 PPP1R8Q12972 351 aaKnown RBP17■□□□□ 0.31
DDX39A-214ENST00000590556 TMPRSS11FQ6ZWK6 438 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 CREB3L2Q70SY1 520 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 UEVLDQ8IX04 471 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 C10orf67Q8IYJ2 551 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 OR4C15Q8NGM1 316 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 OPN3Q9H1Y3 402 aaPredicted RBP17■□□□□ 0.31
DDX39A-214ENST00000590556 DENND2DQ9H6A0 471 aaPredicted RBP17■□□□□ 0.31
DDX39A-214ENST00000590556 ARMC1Q9NVT9 282 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 PARPBPQ9NWS1 579 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 TAS2R5Q9NYW4 299 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 B3GAT1Q9P2W7 334 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 DNAJB9Q9UBS3 223 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 NOX1Q9Y5S8 564 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 U3KQV3 271 aa17■□□□□ 0.31
DDX39A-214ENST00000590556 C11orf98E9PRG8 122 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 MSTNO14793 375 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 MRPL33O75394 65 aaKnown RBP16.99■□□□□ 0.31
DDX39A-214ENST00000590556 CCNB2O95067 398 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 OMPP47874 163 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 SLC9A3P48764 834 aa16.99■□□□□ 0.31
DDX39A-214ENST00000590556 ASCL1P50553 236 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms