RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SOX15O60248 233 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 PPP1R3DO95685 299 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 IGSF6O95976 241 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 ZGLP1P0C6A0 271 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 SFTA3P0C7M3 94 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 GSTM3P21266 225 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 EDNRAP25101 427 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 CORO1AP31146 461 aaKnown RBP13.95□□□□□ -0.18
CIRBP-228ENST00000590347 EIF2S3P41091 472 aaKnown RBP13.95□□□□□ -0.18
CIRBP-228ENST00000590347 TAS2R20P59543 309 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 ST8SIA6P61647 398 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 TBPL1P62380 186 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 SCGB2B2Q4G0G5 96 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 OTPQ5XKR4 325 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 THSD4Q6ZMP0 1018 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 STOML3Q8TAV4 291 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 DMRT3Q9NQL9 472 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 DNAJB11Q9UBS4 358 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 PISDQ9UG56 409 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 OR5V1Q9UGF6 321 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 FARSAQ9Y285 508 aaKnown RBP13.95□□□□□ -0.18
CIRBP-228ENST00000590347 ZNF879B4DU55 563 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 PLPP2O43688 288 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 RNF212Q495C1 297 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 CLEC9AQ6UXN8 241 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 TMPPEQ6ZT21 453 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 MEPCEQ7L2J0 689 aaKnown RBP13.95□□□□□ -0.18
CIRBP-228ENST00000590347 PXKQ7Z7A4 578 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 LRRC56Q8IYG6 542 aaPredicted RBP13.95□□□□□ -0.18
CIRBP-228ENST00000590347 PFN4Q8NHR9 129 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 TCTEX1D2Q8WW35 142 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 SMPDL3AQ92484 453 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 CASD1Q96PB1 797 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 ABRACLQ9P1F3 81 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 FOXJ3Q9UPW0 622 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 NPFFR2Q9Y5X5 522 aa13.95□□□□□ -0.18
CIRBP-228ENST00000590347 CNTRLQ7Z7A1 2325 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 TRAV27A0A087WT01 109 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 A0A1B0GTQ1 180 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 M0R036 132 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 PIN1P1O15428 100 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 TSPAN6O43657 245 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 VNN2O95498 520 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 MAS1P04201 325 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 CHAF1BQ13112 559 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 NKPD1Q17RQ9 610 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 SLCO4C1Q6ZQN7 724 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 KCTD9Q7L273 389 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 TGIF2LXQ8IUE1 241 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 RAD51AP1Q96B01 352 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 NEURL3Q96EH8 262 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
CIRBP-228ENST00000590347 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 HEATR5BQ9P2D3 2071 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 ZNF346Q9UL40 294 aaKnown RBP13.94□□□□□ -0.18
CIRBP-228ENST00000590347 BCL2L11O43521 198 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 TBL1XO60907 577 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 THY1P04216 161 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 SLC9A5Q14940 896 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 PON3Q15166 354 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 ARL11Q969Q4 196 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 MISP3Q96FF7 219 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 BBS4Q96RK4 519 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 RNF208Q9H0X6 261 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 OR52D1Q9H346 318 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 SUV39H2Q9H5I1 410 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 C20orf141Q9NUB4 165 aa13.94□□□□□ -0.18
CIRBP-228ENST00000590347 A0A1B0GTH9 108 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 C13orf42A0A1B0GVH6 325 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 FEZF1A0PJY2 475 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 GFYI3L273 518 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 CLDN11O75508 207 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 GALTP07902 379 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 PGAM2P15259 253 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 RBM34P42696 430 aaKnown RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 EFNB2P52799 333 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 CDH4P55283 916 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ACSM1Q08AH1 577 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ELAVL2Q12926 359 aaKnown RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 CRMP1Q14194 572 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 NKAPLQ5M9Q1 402 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ELFN2Q5R3F8 820 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ZNF620Q6ZNG0 422 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TEAD3Q99594 435 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ACKR4Q9NPB9 350 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 A4GALTQ9NPC4 353 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 SIRT3Q9NTG7 399 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 COMMD9Q9P000 198 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TRBV5-4A0A0C4DH59 114 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 A0A1B0GVT2 93 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 C2orf74A8MZ97 194 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 IL5P05113 134 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 NDUFV2P19404 249 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 VEGFBP49765 207 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 OSTF1Q92882 214 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 SLC35G5Q96KT7 338 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms