RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 C3orf33Q6P1S2 294 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 THSD4Q6ZMP0 1018 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 NET1Q7Z628 596 aaPredicted RBP7.46□□□□□ -1.22
SDF2-204ENST00000587338 PEG10Q86TG7 708 aaKnown RBP7.46□□□□□ -1.22
SDF2-204ENST00000587338 MSRB3Q8IXL7 192 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 TMCO5AQ8N6Q1 288 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 WDR31Q8NA23 367 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 SLC16A11Q8NCK7 471 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 NUP43Q8NFH3 380 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 OR8J3Q8NGG0 315 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 OR52E4Q8NGH9 312 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 FAM216AQ8WUB2 273 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 HOXB13Q92826 284 aaPredicted RBP7.46□□□□□ -1.22
SDF2-204ENST00000587338 ZNF764Q96H86 408 aaPredicted RBP7.46□□□□□ -1.22
SDF2-204ENST00000587338 MRGPRX4Q96LA9 322 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 LRGUKQ96M69 825 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 MS4A4EQ96PG1 132 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 PCDHAC1Q9H158 963 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 TPT1P8Q9HAU6 139 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 ACSS1Q9NUB1 689 aaPredicted RBP7.46□□□□□ -1.22
SDF2-204ENST00000587338 ZCCHC3Q9NUD5 404 aaKnown RBP7.46□□□□□ -1.22
SDF2-204ENST00000587338 TAS2R7Q9NYW3 318 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 ABCD2Q9UBJ2 740 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 MALT1Q9UDY8 824 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 EGFL7Q9UHF1 273 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 ICAM5Q9UMF0 924 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 POMPQ9Y244 141 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 AP3M1Q9Y2T2 418 aa7.46□□□□□ -1.22
SDF2-204ENST00000587338 PRKDCP78527 4128 aaKnown RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 ELOVL7A1L3X0 281 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 H3BNH8 94 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 TRIM77I1YAP6 450 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 GTPBP1O00178 669 aaKnown RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 LILRA1O75019 489 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 C1QCP02747 245 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 TACSTD2P09758 323 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 IFI6P09912 130 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 ZCCHC18P0CG32 403 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 DAOP14920 347 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 NCK1P16333 377 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 ATP6V1C1P21283 382 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 CCT3P49368 545 aaKnown RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 DIO1P49895 249 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 DVL1P1P54792 670 aaPredicted RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 POU6F2P78424 691 aaPredicted RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 FLOT2Q14254 428 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 QPRTQ15274 297 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 TRIP10Q15642 601 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 MIDNQ504T8 468 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.45□□□□□ -1.22
SDF2-204ENST00000587338 PGM2L1Q6PCE3 622 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 VHLLQ6RSH7 139 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 KLHL24Q6TFL4 600 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 CASP12Q6UXS9 341 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 CYP2R1Q6VVX0 501 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 DEF8Q6ZN54 512 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 C6orf120Q7Z4R8 191 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 GLCCI1Q86VQ1 547 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 SPATA24Q86W54 205 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 DHFR2Q86XF0 187 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 RNF130Q86XS8 419 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 ZNF614Q8N883 585 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 ZNF527Q8NB42 609 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 BHLHE22Q8NFJ8 381 aaPredicted RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 OR2T12Q8NG77 320 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 GPR119Q8TDV5 335 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 WDR60Q8WVS4 1066 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 STMN2Q93045 179 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 ZNF524Q96C55 264 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 C16orf58Q96GQ5 468 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 SLC35G5Q96KT7 338 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 MUS81Q96NY9 551 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 KCNS3Q9BQ31 491 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 RBM4Q9BWF3 364 aaKnown RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 QRSL1Q9H0R6 528 aaKnown RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 RAB1BQ9H0U4 201 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 RAD21L1Q9H4I0 556 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 IKZF5Q9H5V7 419 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 DENND2DQ9H6A0 471 aaPredicted RBP7.45□□□□□ -1.22
SDF2-204ENST00000587338 SLC17A5Q9NRA2 495 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 CD300AQ9UGN4 299 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 PCDHB10Q9UN67 800 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 USP22Q9UPT9 525 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 CORO2BQ9UQ03 480 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 AMDHD2Q9Y303 409 aa7.45□□□□□ -1.22
SDF2-204ENST00000587338 IGKV3D-15A0A087WSY6 115 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 TRBV5-3A0A0A0MS03 114 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 FAM220BPB1ANY3 271 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 B9A039 149 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 SULT2B1O00204 365 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 DNAJA2O60884 412 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 ENTPD5O75356 428 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 MRPL33O75394 65 aaKnown RBP7.44□□□□□ -1.22
SDF2-204ENST00000587338 ERCC1P07992 297 aaPredicted RBP7.44□□□□□ -1.22
SDF2-204ENST00000587338 ETFAP13804 333 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 HSD17B1P14061 328 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 IFNGR1P15260 489 aa7.44□□□□□ -1.22
SDF2-204ENST00000587338 HOXB9P17482 250 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms