RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ITGA5P08648 1049 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 LOXP28300 417 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 OR1E2P47887 323 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 GSK3BP49841 420 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 SELENOPP49908 381 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 CLDN17P56750 224 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 PSME3P61289 254 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 ABHD12BQ7Z5M8 362 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 EPHX4Q8IUS5 362 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 ADPRHL1Q8NDY3 354 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 MPP4Q96JB8 637 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 OXGR1Q96P68 337 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 MOGAT1Q96PD6 335 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 KCTD14Q9BQ13 255 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 ESRP2Q9H6T0 727 aaKnown RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 SPAG4Q9NPE6 437 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 AKAP9Q99996 3911 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 ZNF587BE7ETH6 402 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 CLOCKO15516 846 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 ATE1O95260 518 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 ZNF682O95780 498 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 MT-ATP6P00846 226 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 THY1P04216 161 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 FOXG1P55316 489 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-207ENST00000587256 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-207ENST00000587256 PMS2P3Q13401 168 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 OR7E24Q6IFN5 339 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 C8orf82Q6P1X6 216 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-207ENST00000587256 SSX8Q7RTT4 187 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 TSPYL5Q86VY4 417 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-207ENST00000587256 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 LURAP1LQ8IV03 231 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 SCAIQ8N9R8 606 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 LRRC37BQ96QE4 947 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 POLR2J2Q9GZM3 115 aaKnown RBP13.05□□□□□ -0.32
ATG4D-207ENST00000587256 POLR2J3Q9H1A7 115 aaKnown RBP13.05□□□□□ -0.32
ATG4D-207ENST00000587256 ADA2Q9NZK5 511 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 B3GAT1Q9P2W7 334 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 RCE1Q9Y256 329 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 RNF115Q9Y4L5 304 aa13.05□□□□□ -0.32
ATG4D-207ENST00000587256 PDLIM1O00151 329 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 SERPINI2O75830 405 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 OR5F1O95221 314 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 LYPD3O95274 346 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 CD3EP07766 207 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 UMPSP11172 480 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 CDH2P19022 906 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-207ENST00000587256 MPGP29372 298 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 SELENOWP63302 87 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 PUDPQ08623 228 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 GABRA6Q16445 453 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 KLHL24Q6TFL4 600 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 PIGWQ7Z7B1 504 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 C1orf162Q8NEQ5 155 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-207ENST00000587256 FAM162AQ96A26 154 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 FOXC2Q99958 501 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 MRPL39Q9NYK5 338 aaKnown RBP13.04□□□□□ -0.32
ATG4D-207ENST00000587256 ABCD2Q9UBJ2 740 aa13.04□□□□□ -0.32
ATG4D-207ENST00000587256 A0A1W2PR80 420 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 TRAF3IP2O43734 574 aaPredicted RBP13.03□□□□□ -0.32
ATG4D-207ENST00000587256 SLC43A1O75387 559 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 OR6A2O95222 327 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 CH25HO95992 272 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 HPRP00739 348 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 PLAUP00749 431 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 SERPINA1P01009 418 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 IFNW1P05000 195 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 AHCYP23526 432 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 IFNA8P32881 189 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 LTBQ06643 244 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 BSPH1Q075Z2 132 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 LGALS3BPQ08380 585 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
ATG4D-207ENST00000587256 PIN1Q13526 163 aaPredicted RBP13.03□□□□□ -0.32
ATG4D-207ENST00000587256 TESK1Q15569 626 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 ACKR1Q16570 336 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 ZNF74Q16587 644 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 DEFB113Q30KQ7 82 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 NCMAPQ5T1S8 102 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 HMBOX1Q6NT76 420 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 SEZ6L2Q6UXD5 910 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 C20orf204Q6ZNR8 217 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 VTCN1Q7Z7D3 282 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 GPR137CQ8N3F9 429 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 C17orf78Q8N4C9 275 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 OR5J2Q8NH18 312 aa13.03□□□□□ -0.32
ATG4D-207ENST00000587256 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms