RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 ZIC4Q8N9L1 334 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 ADAMTS16Q8TE57 1224 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 MPP4Q96JB8 637 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 ZNF385AQ96PM9 386 aaKnown RBP18.17■□□□□ 0.5
CIRBP-209ENST00000586555 HS3ST6Q96QI5 342 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 WFDC6Q9BQY6 131 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 SLC7A10Q9NS82 523 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 SH3GLB1Q9Y371 365 aa18.17■□□□□ 0.5
CIRBP-209ENST00000586555 FREM1Q5H8C1 2179 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 IGKV1D-42A0A075B6H8 117 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 AKAP8O43823 692 aaKnown RBP18.16■□□□□ 0.5
CIRBP-209ENST00000586555 SNX3O60493 162 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 FZD7O75084 574 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 CD3EP07766 207 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 LOXP28300 417 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-209ENST00000586555 GRPRP30550 384 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 KDELR2P33947 212 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 GNGT1P63211 74 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 NCMAPQ5T1S8 102 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 MICU2Q8IYU8 434 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 ADPRHL1Q8NDY3 354 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 C1orf162Q8NEQ5 155 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-209ENST00000586555 LZICQ8WZA0 190 aa18.16■□□□□ 0.5
CIRBP-209ENST00000586555 POLR2J2Q9GZM3 115 aaKnown RBP18.16■□□□□ 0.5
CIRBP-209ENST00000586555 POLR2J3Q9H1A7 115 aaKnown RBP18.16■□□□□ 0.5
CIRBP-209ENST00000586555 LOC102725191A0A1B0GVB3 256 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 M0R082 166 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 MT-ATP6P00846 226 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 DRD4P21917 467 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 MPGP29372 298 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 PRDX6P30041 224 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 NPTX1Q15818 432 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 LRRC23Q53EV4 343 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-209ENST00000586555 NIPAL3Q6P499 406 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 KLHL17Q6TDP4 642 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 LINC00114Q6XXX2 140 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 HACD2Q6Y1H2 254 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 CARM1Q86X55 608 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 EPHX4Q8IUS5 362 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 P3H2Q8IVL5 708 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 C17orf78Q8N4C9 275 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 SCAIQ8N9R8 606 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 ZNF417Q8TAU3 575 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 MUS81Q96NY9 551 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 ZNF587Q96SQ5 575 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-209ENST00000586555 PCDHAC1Q9H158 963 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 SLC7A7Q9UM01 511 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 RCE1Q9Y256 329 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 RNF115Q9Y4L5 304 aa18.15■□□□□ 0.5
CIRBP-209ENST00000586555 RAI1Q7Z5J4 1906 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-209ENST00000586555 NSD1Q96L73 2696 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-209ENST00000586555 GSTA4O15217 222 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 CBLP22681 906 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 IFNA8P32881 189 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 NUDT2P50583 147 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 CLDN17P56750 224 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 LIPEQ05469 1076 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 PMS2P3Q13401 168 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 GABRA6Q16445 453 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 SHEQ5VZ18 495 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 LSRQ86X29 649 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-209ENST00000586555 RBM45Q8IUH3 476 aaKnown RBP18.14■□□□□ 0.49
CIRBP-209ENST00000586555 SLC15A3Q8IY34 581 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 KDM8Q8N371 416 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 CCL19Q99731 98 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 PIP5K1AQ99755 562 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 TMEM204Q9BSN7 226 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 SLC19A3Q9BZV2 496 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 MYLK2Q9H1R3 596 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 CMTM6Q9NX76 183 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 USP22Q9UPT9 525 aa18.14■□□□□ 0.49
CIRBP-209ENST00000586555 ZNF587BE7ETH6 402 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 PDLIM1O00151 329 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 CLOCKO15516 846 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 SLC43A1O75387 559 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 BGLAPP02818 100 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 ITGA5P08648 1049 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 CRYBA2P53672 197 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 SELENOWP63302 87 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 NKX6-1P78426 367 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-209ENST00000586555 CYBRD1Q53TN4 286 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 C9orf135Q5VTT2 229 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 KLHL24Q6TFL4 600 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 TREML1Q86YW5 311 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 UEVLDQ8IX04 471 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 OR4D11Q8NGI4 311 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 OR52N5Q8NH56 324 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 SLC41A3Q96GZ6 507 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 TPD52L3Q96J77 140 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 LINC00470Q9BZP3 86 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 MRPL39Q9NYK5 338 aaKnown RBP18.13■□□□□ 0.49
CIRBP-209ENST00000586555 AMDHD2Q9Y303 409 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 MAGED1Q9Y5V3 778 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-209ENST00000586555 ABCA2Q9BZC7 2435 aa18.13■□□□□ 0.49
CIRBP-209ENST00000586555 TLN2Q9Y4G6 2542 aa18.12■□□□□ 0.49
CIRBP-209ENST00000586555 HS3ST1O14792 307 aa18.12■□□□□ 0.49
CIRBP-209ENST00000586555 SMPD2O60906 423 aa18.12■□□□□ 0.49
CIRBP-209ENST00000586555 OR6A2O95222 327 aa18.12■□□□□ 0.49
CIRBP-209ENST00000586555 WNT11O96014 354 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms