RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 IL7RP16871 459 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 DRD4P21917 467 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 THBS4P35443 961 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 SEC24CP53992 1094 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 STX1BP61266 288 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 HPCAP84074 193 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 HOXC5Q00444 222 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 NAAAQ02083 359 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 TGFBR3Q03167 851 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 CR1LQ2VPA4 569 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 TMEM225Q6GV28 225 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 NIPAL3Q6P499 406 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 ZNF836Q6ZNA1 936 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 LRRC74BQ6ZQY2 392 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 SLC46A3Q7Z3Q1 461 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 MIER2Q8N344 545 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 ZNF837Q96EG3 531 aaPredicted RBP10.09□□□□□ -0.79
LIG3-207ENST00000586119 CCDC115Q96NT0 180 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 TRNT1Q96Q11 434 aaKnown RBP10.09□□□□□ -0.79
LIG3-207ENST00000586119 ALKBH3Q96Q83 286 aaPredicted RBP10.09□□□□□ -0.79
LIG3-207ENST00000586119 ZBTB18Q99592 522 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 RSPO3Q9BXY4 272 aaPredicted RBP10.09□□□□□ -0.79
LIG3-207ENST00000586119 RABEP2Q9H5N1 569 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 MTHFD2LQ9H903 347 aaPredicted RBP10.09□□□□□ -0.79
LIG3-207ENST00000586119 ZIM2Q9NZV7 527 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 SEC14L4Q9UDX3 406 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 BTNL2Q9UIR0 455 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 DYSFO75923 2080 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 LOC390937A0A1W2PQ73 354 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 SH3PXD2BA1X283 911 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 TMEM229AB2RXF0 380 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 E9PBE3 544 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 HAX1O00165 279 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 LILRA1O75019 489 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 KRT33AO76009 404 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 GPIP06744 558 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 ZNF23P17027 643 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 CXCR1P25024 350 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 THBS2P35442 1172 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 MVDP53602 400 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 SNRPD2P62316 118 aaKnown RBP10.08□□□□□ -0.8
LIG3-207ENST00000586119 SQLEQ14534 574 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 TRIP10Q15642 601 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 RPS26P11Q5JNZ5 115 aaPredicted RBP10.08□□□□□ -0.8
LIG3-207ENST00000586119 KLHL24Q6TFL4 600 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 SPATA21Q7Z572 469 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 CMIPQ8IY22 773 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 POMGNT2Q8NAT1 580 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 OIT3Q8WWZ8 545 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 THOC1Q96FV9 657 aaKnown RBP10.08□□□□□ -0.8
LIG3-207ENST00000586119 BOD1Q96IK1 185 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 PANX1Q96RD7 426 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 DOK1Q99704 481 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 SF3B5Q9BWJ5 86 aaKnown RBP10.08□□□□□ -0.8
LIG3-207ENST00000586119 PLK3Q9H4B4 646 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 FKBP7Q9Y680 259 aa10.08□□□□□ -0.8
LIG3-207ENST00000586119 CDHR4A6H8M9 788 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 B9A039 149 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 NDUFS8O00217 210 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 FAAHO00519 579 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 FRS3O43559 492 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 SNX3O60493 162 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 SLC22A3O75751 556 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 CRYAAP02489 173 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 IL6P05231 212 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 DBIP07108 87 aaKnown RBP10.07□□□□□ -0.8
LIG3-207ENST00000586119 ETFAP13804 333 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 ARF1P84077 181 aaKnown RBP10.07□□□□□ -0.8
LIG3-207ENST00000586119 ROR2Q01974 943 aaKnown RBP10.07□□□□□ -0.8
LIG3-207ENST00000586119 LRRC74AQ0VAA2 488 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 MSMPQ1L6U9 139 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 GTDC1Q4AE62 458 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 PHYHD1Q5SRE7 291 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 C1orf140Q5VVS0 124 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 PIGWQ7Z7B1 504 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 SVOPLQ8N434 492 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 OR52P1PQ8NH57 321 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 C10orf82Q8WW14 230 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 SLC25A36Q96CQ1 311 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 OR52E6Q96RD3 313 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 ELAC2Q9BQ52 826 aaKnown RBP10.07□□□□□ -0.8
LIG3-207ENST00000586119 CRNNQ9UBG3 495 aaPredicted RBP10.07□□□□□ -0.8
LIG3-207ENST00000586119 PRDM4Q9UKN5 801 aa10.07□□□□□ -0.8
LIG3-207ENST00000586119 ARPC4-TTLL3A0A0A6YYG9 625 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 A8MVM7 634 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 ZNF587BE7ETH6 402 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 hCG_2039718K7EN88 272 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 SLC22A2O15244 555 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 CCDC22O60826 627 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 NPIPB7O75200 414 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 SEC14L2O76054 403 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 FAM107AO95990 144 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 IGLV1-44P01699 117 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 PGRP06401 933 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 NUDT7P0C024 238 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 DAOP14920 347 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 NCF2P19878 526 aaPredicted RBP10.06□□□□□ -0.8
LIG3-207ENST00000586119 CBLP22681 906 aa10.06□□□□□ -0.8
LIG3-207ENST00000586119 IDH3GP51553 393 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms