RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 OCIAD1Q9NX40 245 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 TRAPPC4Q9Y296 219 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 TMED7Q9Y3B3 224 aa10.24□□□□□ -0.77
LIG3-204ENST00000585740 hCG_2014768A0A024R1R8 64 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 IGHV3-20A0A0C4DH32 117 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 TEX13CA0A0J9YWL9 993 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 C9J4A7 227 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 LRRN3E7EW58 273 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 J3QLW9 94 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 OR2T1O43869 369 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 AHSA1O95433 338 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 IGHEP01854 428 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 MRPL3P09001 348 aaKnown RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 CLUP10909 449 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 ZNF19P17023 458 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 SDC2P34741 201 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 MTNR1BP49286 362 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 CENPAP49450 140 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 MAP2K6P52564 334 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 DEFA1P59665 94 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 DEFA3P59666 94 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 LTBQ06643 244 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 MRPL28Q13084 256 aaKnown RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 HNRNPA0Q13151 305 aaKnown RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 MFSD13AQ14CX5 517 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 CDONQ4KMG0 1287 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 DDI2Q5TDH0 399 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 LEG1Q6P5S2 330 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 B3GLCTQ6Y288 498 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 PLEKHG7Q6ZR37 379 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 BTLAQ7Z6A9 289 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 ZBTB44Q8NCP5 570 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 RASD2Q96D21 266 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 ZMYND19Q96E35 227 aaPredicted RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 KTI12Q96EK9 354 aaPredicted RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 LOXL4Q96JB6 756 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 C4orf36Q96KX1 117 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 MOGAT1Q96PD6 335 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 TBX5Q99593 518 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 TMED9Q9BVK6 235 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 BARHL1Q9BZE3 327 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 SP140LQ9H930 580 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 ISG20L2Q9H9L3 353 aaKnown RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 KLHL1Q9NR64 748 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 RXFP3Q9NSD7 469 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 GRHPRQ9UBQ7 328 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 ADAM30Q9UKF2 790 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 YARS2Q9Y2Z4 477 aaKnown RBP10.23□□□□□ -0.77
LIG3-204ENST00000585740 ADAM18Q9Y3Q7 739 aa10.23□□□□□ -0.77
LIG3-204ENST00000585740 LOC102723996A0A087X1L8 192 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 A0A1W2PQL4 384 aaPredicted RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 OR6C68A6NDL8 312 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 PATE3B3GLJ2 98 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 B4E171 279 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 CTDSP2O14595 271 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 KHNYNO15037 678 aaKnown RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 OGG1O15527 345 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 RGS5O15539 181 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 SUSD5O60279 629 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 NPIPB7O75200 414 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 GYPBP06028 91 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 ACP1P24666 158 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 MYL9P24844 172 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 TNFSF8P32971 234 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 APOBEC1P41238 236 aaKnown RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 TSPAN7P41732 249 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 PPP3R1P63098 170 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 MXD1Q05195 221 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 RPL18Q07020 188 aaKnown RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 EXT1Q16394 746 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 SGCBQ16585 318 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 COL28A1Q2UY09 1125 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 CCDC58Q4VC31 144 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 FAM69AQ5T7M9 428 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 VASNQ6EMK4 673 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 DESI1Q6ICB0 168 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 RPL22L1Q6P5R6 122 aaKnown RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 SLC16A9Q7RTY1 509 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 KCTD20Q7Z5Y7 419 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 TPRA1Q86W33 373 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 LYSMD2Q8IV50 215 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 BMPERQ8N8U9 685 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 TEX19Q8NA77 164 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 LSM14AQ8ND56 463 aaKnown RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 OR2T4Q8NH00 348 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 OR5J2Q8NH18 312 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 NEIL3Q8TAT5 605 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 DUSP19Q8WTR2 217 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 SNX33Q8WV41 574 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 THAP4Q8WY91 577 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 ACOT12Q8WYK0 555 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 TAAR8Q969N4 342 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 KIAA1143Q96AT1 154 aaPredicted RBP10.22□□□□□ -0.77
LIG3-204ENST00000585740 Q96M85 177 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 NMNAT3Q96T66 252 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 TIMP4Q99727 224 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 CTRCQ99895 268 aa10.22□□□□□ -0.77
LIG3-204ENST00000585740 ALG12Q9BV10 488 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms