RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ATP6V0A1Q93050 837 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 ATP6V1E2Q96A05 226 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 MCHR1Q99705 422 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 FEM1AQ9BSK4 669 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 UPF3BQ9BZI7 483 aaKnown RBP2.14□□□□□ -2.07
COPS3-217ENST00000583160 SLC25A51Q9H1U9 297 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 RWDD1Q9H446 243 aaPredicted RBP2.14□□□□□ -2.07
COPS3-217ENST00000583160 P2RX2Q9UBL9 471 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 MTRF1LQ9UGC7 380 aaKnown RBP2.14□□□□□ -2.07
COPS3-217ENST00000583160 UGT2A1Q9Y4X1 527 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 ADGRA3Q8IWK6 1321 aa2.14□□□□□ -2.07
COPS3-217ENST00000583160 NUP214P35658 2090 aaPredicted RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 PIKFYVEQ9Y2I7 2098 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 CFAP54Q96N23 3096 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 IGLV3-22A0A075B6J6 115 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 ESYT2A0FGR8 921 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 TMEM150BA6NC51 233 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 WASHC1A8K0Z3 465 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 VEGFDO43915 354 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 FAM189A1O60320 539 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 KINO60870 393 aaKnown RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 ZNF780AO75290 641 aaPredicted RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 STX11O75558 287 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 IGKV1-17P01599 117 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 IGHDP01880 384 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 PCCBP05166 539 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 GOLGA8HP0CJ92 632 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 CALM1P0DP23 149 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 CALM2P0DP24 149 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 CALM3P0DP25 149 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 HOXB8P17481 243 aaPredicted RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 ATP5A1P25705 553 aaKnown RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 CHMLP26374 656 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 PRDX6P30041 224 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 NBL1P41271 181 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 RPS9P46781 194 aaKnown RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 SNAP25P60880 206 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 ARF5P84085 180 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 SIGLEC14Q08ET2 396 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 SLC10A7Q0GE19 358 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 SLAQ13239 276 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 GPM6BQ13491 265 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 XKR4Q5GH76 650 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 GPR157Q5UAW9 335 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 FAM71E1Q6IPT2 247 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 ABHD12BQ7Z5M8 362 aaPredicted RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 CCNYQ8ND76 341 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 UPRTQ96BW1 309 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 MS4A14Q96JA4 679 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 OR2M2Q96R28 347 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 PELOQ9BRX2 385 aaKnown RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 LY9Q9HBG7 655 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 RGS18Q9NS28 235 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 RBAKQ9NYW8 714 aaPredicted RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 XPO7Q9UIA9 1087 aaKnown RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 DNPEPQ9ULA0 475 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 PTPRZ1P23471 2315 aaPredicted RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 RIF1Q5UIP0 2472 aaKnown RBP2.13□□□□□ -2.07
COPS3-217ENST00000583160 CABIN1Q9Y6J0 2220 aa2.13□□□□□ -2.07
COPS3-217ENST00000583160 C2orf16Q68DN1 1984 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 MYO15AQ9UKN7 3530 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 VPS13AQ96RL7 3174 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 E7EWF7 191 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 GFYI3L273 518 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 FCN1O00602 326 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 ANXA4P09525 319 aaPredicted RBP2.12□□□□□ -2.07
COPS3-217ENST00000583160 ZNF286BP0CG31 522 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 DNAJB1P25685 340 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 KIF5BP33176 963 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 CRYBB1P53674 252 aaPredicted RBP2.12□□□□□ -2.07
COPS3-217ENST00000583160 MTTPP55157 894 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 BDH1Q02338 343 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 TRDNQ13061 729 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 RPA4Q13156 261 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 SNX1Q13596 522 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 USH1GQ495M9 461 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 CEP55Q53EZ4 464 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 TCEAL5Q5H9L2 206 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 CASC10Q5T4H9 136 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 OR52W1Q6IF63 320 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 ACP7Q6ZNF0 438 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 LPCAT2Q7L5N7 544 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 UBALD2Q8IYN6 164 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 MYOCDQ8IZQ8 938 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 STKLD1Q8NE28 680 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 DUSP18Q8NEJ0 188 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 SLC22A8Q8TCC7 542 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 TMEM158Q8WZ71 300 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 SDSLQ96GA7 329 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 MBOAT7Q96N66 472 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 CYP2S1Q96SQ9 504 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 RASL11BQ9BPW5 248 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 NRIP2Q9BQI9 281 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 TMEM117Q9H0C3 514 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 CWH43Q9H720 699 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 PSTPIP2Q9H939 334 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 MID1IP1Q9NPA3 183 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 AIG1Q9NVV5 245 aa2.12□□□□□ -2.07
COPS3-217ENST00000583160 ARGLU1Q9NWB6 273 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms