RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF620Q6ZNG0 422 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 PAQR7Q86WK9 346 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RALGPS2Q86X27 583 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 NBPF5PQ86XG9 351 aaPredicted RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 NUDCD3Q8IVD9 361 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 SUMF2Q8NBJ7 301 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 TRPV1Q8NER1 839 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 OR13C2Q8NGS9 318 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RDH5Q92781 318 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 ITCHQ96J02 903 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 PANX2Q96RD6 677 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 RASL11BQ9BPW5 248 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 DAZ3Q9NR90 486 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 MMP17Q9ULZ9 603 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 NEUROG3Q9Y4Z2 214 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 NPTNQ9Y639 398 aa3.17□□□□□ -1.9
SMCHD1-205ENST00000581383 FAM240BA0A1B0GVZ2 78 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 OR52A4PA6NMU1 304 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 GJE1A6NN92 205 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 TRAF3IP2O43734 574 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 FAM189A1O60320 539 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 SERPINA3P01011 423 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 CHTF8P0CG12 524 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 ETS2P15036 469 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 PRDX3P30048 256 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 EPS15P42566 896 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 SCRN3Q0VDG4 424 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 MRPL28Q13084 256 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 PDIA2Q13087 525 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 DDX39BQ13838 428 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 BOLA3Q53S33 107 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 GPR157Q5UAW9 335 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 RNF138Q8WVD3 245 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 MYDGFQ969H8 173 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 FBXO32Q969P5 355 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 TM4SF19Q96DZ7 209 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 C12orf42Q96LP6 360 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 MBOAT4Q96T53 435 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 ROGDIQ9GZN7 287 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 NXF3Q9H4D5 531 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 AZI2Q9H6S1 392 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 NMRAL1Q9HBL8 299 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 GIN1Q9NXP7 522 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 QPCTLQ9NXS2 382 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 SUN2Q9UH99 717 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 ZNF639Q9UID6 485 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 HPCAL4Q9UM19 191 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 NEU3Q9UQ49 428 aa3.16□□□□□ -1.9
SMCHD1-205ENST00000581383 KANK1Q14678 1352 aa3.15□□□□□ -1.9
SMCHD1-205ENST00000581383 KIR2DL5BA0A0G2JN68 375 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 KIR2DL5BA0A0G2JPC4 375 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 WI2-2373I1.2A0A1W2PRP0 233 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 INSP01308 110 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 ICAM2P13598 275 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 NCF2P19878 526 aaPredicted RBP3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 TBPP20226 339 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 MX1P20591 662 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 CCNE1P24864 410 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 CD1CP29017 333 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 CDH4P55283 916 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 LRRC31Q6UY01 552 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF546Q86UE3 836 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 PLA2G4DQ86XP0 818 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 TGIF2LXQ8IUE1 241 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 KIR2DL5AQ8N109 375 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 FNDC5Q8NAU1 212 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 OR1L6Q8NGR2 347 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 KIR2DL5BQ8NHK3 375 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 PYROXD1Q8WU10 500 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 NDRG1Q92597 394 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 NT5C3BQ969T7 300 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 FCRL1Q96LA6 429 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 RIOK1Q9BRS2 568 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 PELOQ9BRX2 385 aaKnown RBP3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 GBA3Q9H227 469 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 SIAEQ9HAT2 523 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 MMP26Q9NRE1 261 aa3.15□□□□□ -1.91
SMCHD1-205ENST00000581383 MEGF6O75095 1541 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 MMP1P03956 469 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 GAPDHP04406 335 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 UBTFL1P0CB47 393 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 ATP1B2P14415 290 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 ZNF17P17021 662 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 SLC2A5P22732 501 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 NUDT1P36639 197 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 GYG1P46976 350 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 TPMTP51580 245 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 RPL23AP62750 156 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 BST1Q10588 318 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 UNC119Q13432 240 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 GK3PQ14409 553 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 DGUOKQ16854 277 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 RABL6Q3YEC7 729 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 KCTD21Q4G0X4 260 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 C6orf226Q5I0X4 101 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 CTSL3PQ5NE16 218 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 H2BFWTQ7Z2G1 175 aa3.14□□□□□ -1.91
SMCHD1-205ENST00000581383 TMEM61Q8N0U2 210 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms