RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 KCNE5Q9UJ90 142 aa12.66□□□□□ -0.38
IFT20-211ENST00000580991 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 NR5A2O00482 541 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 GSC2O15499 205 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 UGT2B17O75795 530 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 LGI1O95970 557 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 SERPINB5P36952 375 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 IDH3AP50213 366 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 TUBA1BP68363 451 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 TUBA4AP68366 448 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 MYBPC1Q00872 1141 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 SPDYE7PQ495Y7 208 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 TUBA1AQ71U36 451 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 ZIC4Q8N9L1 334 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 PSMA8Q8TAA3 256 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 NANPQ8TBE9 248 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 MAGEE2Q8TD90 523 aaPredicted RBP12.65□□□□□ -0.38
IFT20-211ENST00000580991 RDH5Q92781 318 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 BCL2L2Q92843 193 aaPredicted RBP12.65□□□□□ -0.38
IFT20-211ENST00000580991 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
IFT20-211ENST00000580991 CADM1Q9BY67 442 aaKnown RBP12.65□□□□□ -0.38
IFT20-211ENST00000580991 MS4A5Q9H3V2 200 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 SEC61A2Q9H9S3 476 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 G6PC2Q9NQR9 355 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 PCDHGB4Q9UN71 923 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 RAP2CQ9Y3L5 183 aa12.65□□□□□ -0.38
IFT20-211ENST00000580991 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 CENPVL1A0A0U1RR11 272 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 A0A0X1KG70 313 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 B2RBV5 119 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 SLC28A1O00337 649 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 WNT9BO14905 357 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 SYNGR3O43761 229 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 FCMRO60667 390 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 STX11O75558 287 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 SKAP2O75563 359 aaPredicted RBP12.64□□□□□ -0.39
IFT20-211ENST00000580991 CIB2O75838 187 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 UROSP10746 265 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
IFT20-211ENST00000580991 CCNA2P20248 432 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 COL8A2P25067 703 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 PRDX6P30041 224 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 RYKP34925 604 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 PGM1P36871 562 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 HTR3AP46098 478 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 NAA20P61599 178 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 LMO4P61968 165 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 METTL21CQ5VZV1 264 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 FAM71CQ8NEG0 241 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 OR9K2Q8NGE7 335 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 OR5D16Q8NGK9 328 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 PMM1Q92871 262 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 MOAP1Q96BY2 351 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 DDIT4LQ96D03 193 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 CCDC126Q96EE4 140 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 ZNF385AQ96PM9 386 aaKnown RBP12.64□□□□□ -0.39
IFT20-211ENST00000580991 EBF4Q9BQW3 602 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
IFT20-211ENST00000580991 C1orf21Q9H246 121 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 PIF1Q9H611 641 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
IFT20-211ENST00000580991 RNPEPL1Q9HAU8 725 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 MKLN1Q9UL63 735 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 SLC35A3Q9Y2D2 325 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
IFT20-211ENST00000580991 CMAHPQ9Y471 501 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
IFT20-211ENST00000580991 A0A096LPE4 126 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 IGHV2OR16-5A0A0B4J2B6 119 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 A0A1W2PPZ6 126 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 DUXAA6NLW8 204 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 M0R233 179 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 PIP5K1BO14986 540 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 NPHS1O60500 1241 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 AK1P00568 194 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 CELA3BP08861 270 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 IMPDH2P12268 514 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 CBR1P16152 277 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 FPR2P25090 351 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 HPCAL1P37235 193 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 EVX1P49640 407 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 DNAJB13P59910 316 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 MXRA7P84157 204 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 DAG1Q14118 895 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 OCLNQ16625 522 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 RFTN2Q52LD8 501 aaPredicted RBP12.63□□□□□ -0.39
IFT20-211ENST00000580991 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
IFT20-211ENST00000580991 HIST2H2BDQ6DRA6 164 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 EPGNQ6UW88 154 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 FRMD7Q6ZUT3 714 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 TREML1Q86YW5 311 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 SFXN5Q8TD22 340 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms