RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 ABCA4P78363 2273 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 MS4A18H0YCH9 400 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 PDLIM1O00151 329 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 HSD17B1P14061 328 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 RBM34P42696 430 aaKnown RBP20.38■□□□□ 0.85
LIMD2-204ENST00000578297 FAPQ12884 760 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 MS4A18Q3C1V0 323 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 IFI44LQ53G44 452 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 TSPO2Q5TGU0 170 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 C10orf53Q8N6V4 93 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 RNF148Q8N7C7 305 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 POMGNT2Q8NAT1 580 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 GEMIN6Q8WXD5 167 aaKnown RBP20.38■□□□□ 0.85
LIMD2-204ENST00000578297 CDRT15Q96T59 188 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 AMBRA1Q9C0C7 1298 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 TAS2R16Q9NYV7 291 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 UPB1Q9UBR1 384 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 CD300AQ9UGN4 299 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 POLQO75417 2590 aa20.38■□□□□ 0.85
LIMD2-204ENST00000578297 LRRN3E7EW58 273 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 KLF4O43474 513 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 IFNW1P05000 195 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 NQO1P15559 274 aaKnown RBP20.37■□□□□ 0.85
LIMD2-204ENST00000578297 MXRA7P84157 204 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 PMS2P3Q13401 168 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 ZNF74Q16587 644 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 FXNQ16595 210 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 SAMD4BQ5PRF9 694 aaKnown RBP20.37■□□□□ 0.85
LIMD2-204ENST00000578297 FKBP9P1Q75LS8 142 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 CDH24Q86UP0 819 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 NKAIN4Q8IVV8 208 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 NSL1Q96IY1 281 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 HSH2DQ96JZ2 352 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 PRRC1Q96M27 445 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 SLCO5A1Q9H2Y9 848 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 GORASP2Q9H8Y8 452 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 MEPEQ9NQ76 525 aaPredicted RBP20.37■□□□□ 0.85
LIMD2-204ENST00000578297 RPS6KA6Q9UK32 745 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 A4GNTQ9UNA3 340 aa20.37■□□□□ 0.85
LIMD2-204ENST00000578297 OR6C65A6NJZ3 312 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 GMNNO75496 209 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 CH25HO95992 272 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 IGF2P01344 180 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 DNAJA1P31689 397 aaKnown RBP20.36■□□□□ 0.85
LIMD2-204ENST00000578297 IFNA8P32881 189 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 SELENOPP49908 381 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 PUDPQ08623 228 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 ST3GAL3Q11203 375 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 C1DQ13901 141 aaKnown RBP20.36■□□□□ 0.85
LIMD2-204ENST00000578297 TAB1Q15750 504 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 SPATS1Q496A3 300 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 BEX5Q5H9J7 111 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 TIMM23BQ5SRD1 257 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 NIPAL3Q6P499 406 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 P2RY8Q86VZ1 359 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 DEFB107AQ8IZN7 70 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 OR5J2Q8NH18 312 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 PIK3IP1Q96FE7 263 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 HS6ST2Q96MM7 605 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 PLEKHF2Q9H8W4 249 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 FKRPQ9H9S5 495 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 DCAF13Q9NV06 445 aaKnown RBP20.36■□□□□ 0.85
LIMD2-204ENST00000578297 RCE1Q9Y256 329 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 SNX13Q9Y5W8 968 aa20.36■□□□□ 0.85
LIMD2-204ENST00000578297 A0A1W2PPR1 153 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 CIB4A0PJX0 185 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 KPNA4O00629 521 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-204ENST00000578297 PLPP3O14495 311 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 ZNF432O94892 652 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 HPRP00739 348 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 MT-ND1P03886 318 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 ITGA5P08648 1049 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 TCN1P20061 433 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-204ENST00000578297 LOXP28300 417 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-204ENST00000578297 FOXG1P55316 489 aaPredicted RBP20.35■□□□□ 0.85
LIMD2-204ENST00000578297 CLDN17P56750 224 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 IL1RL1Q01638 556 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 SSX8Q7RTT4 187 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 WFDC8Q8IUA0 241 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 UEVLDQ8IX04 471 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 FAM156AQ8NDB6 213 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 BCAS4Q8TDM0 211 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 TMEM255BQ8WV15 326 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 TMEM239Q8WW34 195 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 NRGNQ92686 78 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 MUS81Q96NY9 551 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 NANSQ9NR45 359 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 ZNF229Q9UJW7 825 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 SPG11Q96JI7 2443 aa20.35■□□□□ 0.85
LIMD2-204ENST00000578297 OR5H1A6NKK0 313 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 B2RBV5 119 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 TRAF3IP2O43734 574 aaPredicted RBP20.34■□□□□ 0.85
LIMD2-204ENST00000578297 RAD51DO75771 328 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 CALB2P22676 271 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 MPGP29372 298 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 UGT2B15P54855 530 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 NR1H2P55055 460 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 STK11Q15831 433 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 OR7E24Q6IFN5 339 aa20.34■□□□□ 0.85
LIMD2-204ENST00000578297 NHLRC1Q6VVB1 395 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms