RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CHST11Q9NPF2 352 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 NANSQ9NR45 359 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 MRPL39Q9NYK5 338 aaKnown RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 KLHL9Q9P2J3 617 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 DNAJB9Q9UBS3 223 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 Q9UFV3 132 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ZNF229Q9UJW7 825 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ING1Q9UK53 422 aaPredicted RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 RNF6Q9Y252 685 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 CORINQ9Y5Q5 1042 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ESPL1Q14674 2120 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 A0A1W2PNV4 684 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HSPB2A8KAH6 182 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 EFCAB9A8MZ26 197 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 PLPP3O14495 311 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 CDC42EP2O14613 210 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 KLF4O43474 513 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 ZG16O60844 167 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 SS18L1O75177 396 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 DEAF1O75398 565 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 TNFSF13O75888 250 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HPRP00739 348 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 PLGP00747 810 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 GASTP01350 101 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HIST1H2ABP04908 130 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 SAGP10523 405 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 CTSSP25774 331 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 DNAJA1P31689 397 aaKnown RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 KIR2DL2P43627 348 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 SLC17A1Q14916 467 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 PDK3Q15120 406 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 RNPS1Q15287 305 aaKnown RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 GUSBP1Q15486 140 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 ATP6AP1Q15904 470 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HSPB2Q16082 182 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 MICAQ29983 383 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 TMEM201Q5SNT2 666 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 ZNF770Q6IQ21 691 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 C1orf94Q6P1W5 598 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 ZFP1Q6P2D0 407 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 PGBD2Q6P3X8 592 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 MTFR2Q6P444 385 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HIST3H2AQ7L7L0 130 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 NUFIP2Q7Z417 695 aaKnown RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 NANOGNBQ7Z5D8 188 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 GPAT4Q86UL3 456 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 C10orf67Q8IYJ2 551 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HS3ST5Q8IZT8 346 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 CNEP1R1Q8N9A8 125 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 SCAIQ8N9R8 606 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 ADPRHL1Q8NDY3 354 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 OR10G2Q8NGC3 310 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 OR13C2Q8NGS9 318 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 OR51A7Q8NH64 312 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 GNPDA2Q8TDQ7 276 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 HIST1H2ACQ93077 130 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 SDCCAG3Q96C92 435 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 GMPPAQ96IJ6 420 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 ZFP3Q96NJ6 502 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 OXGR1Q96P68 337 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 TNFRSF13CQ96RJ3 184 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 PKP2Q99959 881 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 SF3B5Q9BWJ5 86 aaKnown RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 BCO1Q9HAY6 547 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 GLRX2Q9NS18 164 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 TAS2R5Q9NYW4 299 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 B3GAT1Q9P2W7 334 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 PLEKHB1Q9UF11 243 aaPredicted RBP7.62□□□□□ -1.19
NUP88-211ENST00000575976 RASD1Q9Y272 281 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 TMEM5Q9Y2B1 443 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 B3GALT5Q9Y2C3 310 aa7.62□□□□□ -1.19
NUP88-211ENST00000575976 UTP20O75691 2785 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 POLEQ07864 2286 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 IGKV3D-15A0A087WSY6 115 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 TRAV27A0A087WT01 109 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 LOC102725191A0A1B0GVB3 256 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 ZNF724A8MTY0 619 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 C11orf98E9PRG8 122 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 BLOC1S5-TXNDC5H3BN57 136 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 RRP9O43818 475 aaKnown RBP7.61□□□□□ -1.19
NUP88-211ENST00000575976 E2F6O75461 281 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 VAMP5O95183 116 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 OR6A2O95222 327 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 IL18BPO95998 194 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 CRHP06850 196 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 YES1P07947 543 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 TSPAN19P0C672 248 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 RNF224P0DH78 156 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 ADORA3P0DMS8 318 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 FCGR1AP12314 374 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 HLA-DOBP13765 273 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 POU2F1P14859 743 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 PRKACGP22612 351 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 AHCYP23526 432 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 AGTR1P30556 359 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 NTF4P34130 210 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 IFNGR2P38484 337 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 AQP2P41181 271 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 GSSP48637 474 aa7.61□□□□□ -1.19
NUP88-211ENST00000575976 SLC9A3P48764 834 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms