RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FAM98BQ52LJ0 330 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF474Q6S9Z5 364 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 CASP12Q6UXS9 341 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 TFAP2EQ6VUC0 442 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZNF730Q6ZMV8 503 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 UEVLDQ8IX04 471 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 UBE2J2Q8N2K1 259 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 TMEM45BQ96B21 275 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 SGTBQ96EQ0 304 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 CLPTM1LQ96KA5 538 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 C7orf34Q96L11 122 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 SEPHS2Q99611 448 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 PIP5K1AQ99755 562 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 HDHD5Q9BXW7 423 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 MAGIXQ9H6Y5 334 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 NMNAT1Q9HAN9 279 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 IL1RAPQ9NPH3 570 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 NDUFAF4Q9P032 175 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 RHCGQ9UBD6 479 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 UPB1Q9UBR1 384 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 NOX1Q9Y5S8 564 aa11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 UTP20O75691 2785 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-206ENST00000573989 LOC102725191A0A1B0GVB3 256 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 A0A1W2PRQ8 180 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 FFAR1O14842 300 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 GSC2O15499 205 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 SEMG1P04279 462 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 PPP3CBP16298 524 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ATP6V1B2P21281 511 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 AHCYP23526 432 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 P2RY4P51582 365 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 UGT2B15P54855 530 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 VLDLRP98155 873 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 MS4A2Q01362 244 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 FAM27E3Q08E93 113 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 DGCR6Q14129 220 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 FLOT2Q14254 428 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 TAF11Q15544 211 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 FGD3Q5JSP0 725 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 FBXW9Q5XUX1 488 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 Q6ZT83 130 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 CREB3L2Q70SY1 520 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 AAED1Q7RTV5 226 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 PIWIL3Q7Z3Z3 882 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 NANOGNBQ7Z5D8 188 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ABHD12BQ7Z5M8 362 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ZDHHC21Q8IVQ6 265 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 FAM86B1Q8N7N1 296 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ACBD4Q8NC06 268 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ACOT11Q8WXI4 607 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 MARVELD3Q96A59 401 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 USB1Q9BQ65 265 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 MEPEQ9NQ76 525 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 KCNN3Q9UGI6 736 aa11.32□□□□□ -0.6
TRAPPC1-206ENST00000573989 ANKHD1Q8IWZ3 2542 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 AQP12BA6NM10 295 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 PLPP3O14495 311 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 RNF13O43567 381 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 KRT33AO76009 404 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 OR7A10O76100 309 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 GADD45GO95257 159 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 IFI30P13284 250 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 FUT1P19526 365 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 UGT2B10P36537 528 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 SPIBQ01892 262 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 LTBQ06643 244 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 ITGADQ13349 1161 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 ANKDD1AQ495B1 522 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 PGM2L1Q6PCE3 622 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 MBOAT2Q6ZWT7 520 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 PXKQ7Z7A4 578 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 AQP12AQ8IXF9 295 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 KDM8Q8N371 416 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 POMGNT2Q8NAT1 580 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 ANKK1Q8NFD2 765 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 STEAP2Q8NFT2 490 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 PFN4Q8NHR9 129 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 LIPHQ8WWY8 451 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 CADM1Q9BY67 442 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 NDEL1Q9GZM8 345 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 OR10A4Q9H209 315 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 ASB6Q9NWX5 421 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 TMCC3Q9ULS5 477 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 RCE1Q9Y256 329 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 TMEM5Q9Y2B1 443 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-206ENST00000573989 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 TCRBV5S2A0A599 114 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 LRRN3E7EW58 273 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 MS4A18H0YCH9 400 aa11.3□□□□□ -0.6
TRAPPC1-206ENST00000573989 BLOC1S5-TXNDC5H3BN57 136 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms