RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 F5H5K5 113 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 ARL6IP5O75915 188 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 MNDAP41218 407 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 UCNP55089 124 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 ZNF658BQ4V348 819 aaPredicted RBP9.21□□□□□ -0.93
SMG6-213ENST00000573166 ANKRD34AQ69YU3 496 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 CBLN3Q6UW01 205 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 PAMR1Q6UXH9 720 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 KLBQ86Z14 1044 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 C9orf40Q8IXQ3 194 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 JAGN1Q8N5M9 183 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 SLC38A9Q8NBW4 561 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 NAXEQ8NCW5 288 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 CHDHQ8NE62 594 aaPredicted RBP9.21□□□□□ -0.93
SMG6-213ENST00000573166 FNDC8Q8TC99 324 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 NMNAT3Q96T66 252 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 EMC6Q9BV81 110 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 SYT4Q9H2B2 425 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 UBQLN3Q9H347 655 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 CDH20Q9HBT6 801 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 MED17Q9NVC6 651 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 KLHL9Q9P2J3 617 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 EXO1Q9UQ84 846 aaKnown RBP9.21□□□□□ -0.93
SMG6-213ENST00000573166 DTX4Q9Y2E6 619 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 NUP210Q8TEM1 1887 aaPredicted RBP9.21□□□□□ -0.93
SMG6-213ENST00000573166 OTOGLQ3ZCN5 2332 aa9.21□□□□□ -0.93
SMG6-213ENST00000573166 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 ANKUB1A6NFN9 424 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CLCA1A8K7I4 914 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 IGHV3-9P01782 118 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 MAP2K4P45985 399 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 MEOX1P50221 254 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 HLCSP50747 726 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CLDN15P56746 228 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 ACTA2P62736 377 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 ACTG2P63267 376 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CFHR1Q03591 330 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CRMP1Q14194 572 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 MAD2L1BPQ15013 274 aaPredicted RBP9.21□□□□□ -0.94
SMG6-213ENST00000573166 LIX1LQ8IVB5 337 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 EXD3Q8N9H8 876 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 GATAD2BQ8WXI9 593 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 SPSB2Q99619 263 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 ANKRD60Q9BZ19 345 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 C12orf49Q9H741 205 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 SP140LQ9H930 580 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 MED20Q9H944 212 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 MMP25Q9NPA2 562 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 NKIRAS2Q9NYR9 191 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 EIF3KQ9UBQ5 218 aaKnown RBP9.21□□□□□ -0.94
SMG6-213ENST00000573166 TRGV5A0A0B4J1U4 118 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 TRBV2A0A0J9YWF9 115 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 ZNF879B4DU55 563 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 VAMP5O95183 116 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CELA2AP08217 269 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CT45A8P0DMV1 189 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CT45A9P0DMV2 189 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 STARP49675 285 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 IL10RAQ13651 578 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 CT45A2Q5DJT8 189 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 LIPKQ5VXJ0 399 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 KLHL17Q6TDP4 642 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 C17orf82Q86X59 251 aaPredicted RBP9.21□□□□□ -0.94
SMG6-213ENST00000573166 NKD1Q969G9 470 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 ZBTB8AQ96BR9 441 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 KCTD7Q96MP8 289 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 MGLLQ99685 303 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 TMEM184BQ9Y519 407 aaPredicted RBP9.21□□□□□ -0.94
SMG6-213ENST00000573166 DNAJC13O75165 2243 aa9.21□□□□□ -0.94
SMG6-213ENST00000573166 TCRBV5S2A0A599 114 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 H3BMQ9 156 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 IL2RAP01589 272 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 CYC1P08574 325 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 RAB40ALP0C0E4 278 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 EIF2B1Q14232 305 aaKnown RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 B3GLCTQ6Y288 498 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 DPY19L2P2Q6ZN68 376 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 ZFP41Q8N8Y5 198 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 CHST4Q8NCG5 386 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 TMEM163Q8TC26 289 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 ZNF721Q8TF20 911 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 COG8Q96MW5 612 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 TGIF2Q9GZN2 237 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 PCDHGA3Q9Y5H0 932 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 ALPK3Q96L96 1907 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 FTCDNL1E5RQL4 147 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 PHYHO14832 338 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 LCATP04180 440 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 ZNF12P17014 697 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 F8A1P23610 371 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 FOXK2Q01167 660 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 LACC1Q8IV20 430 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 PNLDC1Q8NA58 520 aaKnown RBP9.2□□□□□ -0.94
SMG6-213ENST00000573166 GPR32P1Q8NGA4 272 aa9.2□□□□□ -0.94
SMG6-213ENST00000573166 RAB2BQ8WUD1 216 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 356.9 ms