RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PLA2G12BQ9BX93 195 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 BCL2L14Q9BZR8 327 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 NAA50Q9GZZ1 169 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 CXXC4Q9H2H0 198 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 RNF41Q9H4P4 317 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 KLHL31Q9H511 634 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 IKZF5Q9H5V7 419 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 MOV10Q9HCE1 1003 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 MLXIPLQ9NP71 852 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 SLC2A9Q9NRM0 540 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 GALPQ9UBC7 116 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 B4GALT7Q9UBV7 327 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ZDHHC2Q9UIJ5 367 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 ST6GALNAC2Q9UJ37 374 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 FBXL4Q9UKA2 621 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 STUB1Q9UNE7 303 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 TFR2Q9UP52 801 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 GINS2Q9Y248 185 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
TOPBP1-210ENST00000572787 KIF24Q5T7B8 1368 aa4.4□□□□□ -1.7
TOPBP1-210ENST00000572787 KAT6AQ92794 2004 aa4.4□□□□□ -1.7
TOPBP1-210ENST00000572787 TRBV7-9A0A0J9YWB2 115 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 A0A1B0GVI7 797 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 TCRBV5S1A1TA0A578 114 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 LRIT2A6NDA9 550 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 OR5K3A6NET4 321 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NKX6-3A6NJ46 265 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 OR2AT4A6NND4 320 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 A8MVM7 634 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 PPP1R2P9O14990 202 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 MPPED1O15442 326 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 RGS16O15492 202 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 ATP8B1O43520 1251 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 EFNA2O43921 213 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 FZD7O75084 574 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 WISP2O76076 250 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 ANGPTL1O95841 491 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SERPINA1P01009 418 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 TCRBP04435 133 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SP1P08047 785 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NGFRP08138 427 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 HOXC6P09630 235 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 MYOGP15173 224 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 XRCC1P18887 633 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 VHLP40337 213 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NBL1P41271 181 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 MAGEA12P43365 314 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 BRCC3P46736 316 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 AVPR1BP47901 424 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 CYB561P49447 251 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 EMDP50402 254 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 HLCSP50747 726 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 DNA2P51530 1060 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 IDH3GP51553 393 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 DLX5P56178 289 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 ZNF33BQ06732 778 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 RGS1Q08116 209 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 AESQ08117 197 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 MAD2L1BPQ15013 274 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SF3A2Q15428 464 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 GABRA6Q16445 453 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 ISXQ2M1V0 245 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC9C1Q4G0N8 1177 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 CYBRD1Q53TN4 286 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SPIN3Q5JUX0 258 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 EMBQ6PCB8 327 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NAPRTQ6XQN6 538 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC25A48Q6ZT89 311 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 PEG10Q86TG7 708 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 GLCCI1Q86VQ1 547 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 CALHM1Q8IU99 346 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 TRAPPC5Q8IUR0 188 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 IQCF1Q8N6M8 205 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 CCDC54Q8NEL0 328 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 OR5M9Q8NGP3 310 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 PIGXQ8TBF5 258 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 RNASEH2CQ8TDP1 164 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 WFIKKN2Q8TEU8 576 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 APH1BQ8WW43 257 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 DLX4Q92988 240 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 PPWD1Q96BP3 646 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NXPE2Q96DL1 559 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 WDR34Q96EX3 536 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 KCNA7Q96RP8 456 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NEURL2Q9BR09 285 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 APOOQ9BUR5 198 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SPRY4Q9C004 299 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 DHX35Q9H5Z1 703 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC25A19Q9HC21 320 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 C6orf50Q9HD87 102 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 XPNPEP1Q9NQW7 623 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 GID8Q9NWU2 228 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 NTMQ9P121 344 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 PILRBQ9UKJ0 227 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 UBQLN1Q9UMX0 589 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 CSNK1G3Q9Y6M4 447 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 USH1CQ9Y6N9 552 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 MTUS2Q5JR59 1369 aa4.4□□□□□ -1.71
TOPBP1-210ENST00000572787 SYNJ2O15056 1496 aa4.39□□□□□ -1.71
TOPBP1-210ENST00000572787 A0A1W2PR80 420 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms