RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ERI3O43414 337 aaKnown RBP15.42■□□□□ 0.06
LITAF-209ENST00000571688 XRCC3O43542 346 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 SLC25A12O75746 678 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 RPN2P04844 631 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 BDKRB2P30411 391 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 SNTB1Q13884 538 aaKnown RBP15.42■□□□□ 0.06
LITAF-209ENST00000571688 AMZ1Q400G9 498 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 STAC2Q6ZMT1 411 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 PGAP1Q75T13 922 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 BOLLQ8N9W6 283 aaKnown RBP15.42■□□□□ 0.06
LITAF-209ENST00000571688 MS4A6EQ96DS6 147 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 MACROD1Q9BQ69 325 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 CMSS1Q9BQ75 279 aaKnown RBP15.42■□□□□ 0.06
LITAF-209ENST00000571688 ZNF230Q9UIE0 474 aaPredicted RBP15.42■□□□□ 0.06
LITAF-209ENST00000571688 ZNF337Q9Y3M9 751 aa15.42■□□□□ 0.06
LITAF-209ENST00000571688 NRG2O14511 850 aaPredicted RBP15.41■□□□□ 0.06
LITAF-209ENST00000571688 KCNJ3P48549 501 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 PLA2G7Q13093 441 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 ARHGAP11BQ3KRB8 267 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 GLT8D1Q68CQ7 371 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 ABHD17CQ6PCB6 329 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 SPAG16Q8N0X2 631 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 BEST3Q8N1M1 668 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
LITAF-209ENST00000571688 OR51L1Q8NGJ5 315 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 CYB5D2Q8WUJ1 264 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 MRGPRX3Q96LB0 322 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 PRDM9Q9NQV7 894 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 GPN3Q9UHW5 284 aaPredicted RBP15.41■□□□□ 0.06
LITAF-209ENST00000571688 SERTAD3Q9UJW9 196 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 CARHSP1Q9Y2V2 147 aaKnown RBP15.41■□□□□ 0.06
LITAF-209ENST00000571688 SPINT1O43278 529 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 HOXA2O43364 376 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 EIF3GO75821 320 aaKnown RBP eCLIP15.41■□□□□ 0.06
LITAF-209ENST00000571688 FGF18O76093 207 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 ACAA1P09110 424 aaPredicted RBP15.41■□□□□ 0.06
LITAF-209ENST00000571688 AKAIN1P0CW23 69 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 ADRA2CP18825 462 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 NANOS3P60323 173 aaKnown RBP15.41■□□□□ 0.06
LITAF-209ENST00000571688 SWI5Q1ZZU3 235 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 OR52E2Q8NGJ4 325 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 IGSF21Q96ID5 467 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 EXO5Q9H790 373 aa15.41■□□□□ 0.06
LITAF-209ENST00000571688 FAM25EA8MYX2 175 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 IDSB3KWA1 339 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 H0YC42 278 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 ZFPL1O95159 310 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 PMS2P2O95744 297 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 AGR2O95994 175 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 ITGB8P26012 769 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 SLC6A6P31641 620 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 CSF2RBP32927 897 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 LTBQ06643 244 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 SMAD2Q15796 467 aaKnown RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 MAMSTRQ6ZN01 415 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TCEAL8Q8IYN2 117 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 LINC01555Q8NAE3 123 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 EDAQ92838 391 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 NUS1Q96E22 293 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TNFRSF13CQ96RJ3 184 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 ZNF471Q9BX82 626 aaPredicted RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 EDARQ9UNE0 448 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TBC1D3KA0A087X1G2 549 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TBC1D3BA6NDS4 549 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TBC1D3FA6NER0 549 aaPredicted RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 ITGB2P05107 769 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 SLC25A4P12235 298 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 EPCAMP16422 314 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 RPS4Y1P22090 263 aaKnown RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 CERS1P27544 350 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 BCL6P41182 706 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 FHL1Q13642 323 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TSC22D1Q15714 1073 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 MRPL2Q5T653 305 aaKnown RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 AVPI1Q5T686 147 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 CST9Q5W186 159 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TBC1D3GQ6DHY5 549 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 OR7G2Q8NG99 324 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 RNF166Q96A37 237 aaPredicted RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 OTUB2Q96DC9 234 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 VRK1Q99986 396 aaPredicted RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 MYEF2Q9P2K5 600 aaKnown RBP15.4■□□□□ 0.06
LITAF-209ENST00000571688 OR10H1Q9Y4A9 318 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
LITAF-209ENST00000571688 RNF222A6NCQ9 220 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 OR5H14A6NHG9 310 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 CRYBA1P05813 215 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 MELTFP08582 738 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 GTF2F2P13984 249 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 NR0B1P51843 470 aaKnown RBP15.39■□□□□ 0.05
LITAF-209ENST00000571688 AKR1C2P52895 323 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 AKR1C1Q04828 323 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 SRSF4Q08170 494 aaKnown RBP15.39■□□□□ 0.05
LITAF-209ENST00000571688 RAB33AQ14088 237 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 C2CD4CQ8TF44 421 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 LRFN5Q96NI6 719 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 SDF2Q99470 211 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 TSPAN10Q9H1Z9 355 aaPredicted RBP15.39■□□□□ 0.05
LITAF-209ENST00000571688 POFUT1Q9H488 388 aa15.39■□□□□ 0.05
LITAF-209ENST00000571688 SYNPO2LQ9H987 977 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms