RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PLEK2Q9NYT0 353 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 GRHPRQ9UBQ7 328 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PCTPQ9UKL6 214 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 UTS2RQ9UKP6 389 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 STK38LQ9Y2H1 464 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 COA3Q9Y2R0 106 aaPredicted RBP5.92□□□□□ -1.46
CHD3-213ENST00000571249 ASB4Q9Y574 426 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 PCNX3Q9H6A9 2034 aa5.92□□□□□ -1.46
CHD3-213ENST00000571249 IGHV3-15A0A0B4J1V0 119 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 A0A1W2PPL8 197 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 NPEPPSL1A6NEC2 478 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 TMEM233B4DJY2 109 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 E9PBE3 544 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 H0YL77 283 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 AZIN1O14977 448 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 PPIHO43447 177 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 TMPRSS11DO60235 418 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 FADS1O60427 444 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 CCNT2O60583 730 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 PEX11AO75192 247 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 NME6O75414 186 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 NDUFA7O95182 113 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 ENO2P09104 434 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 GFAPP14136 432 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 CPMP14384 443 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 NCF2P19878 526 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 EPHA3P29320 983 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 SDHAP31040 664 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 PGM1P36871 562 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 RAD52P43351 418 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 CCNG1P51959 295 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 PNLIPRP2P54317 469 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 CDKL1Q00532 357 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 MGAT2Q10469 447 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 GABRA6Q16445 453 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 ARMCX4Q5H9R4 360 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 ELFN2Q5R3F8 820 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 KHDRBS2Q5VWX1 349 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 ZFAND6Q6FIF0 208 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 OR52E8Q6IFG1 317 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 NET1Q7Z628 596 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 MARCH3Q86UD3 253 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 UBE2J2Q8N2K1 259 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 ZCCHC7Q8N3Z6 543 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 OR4K14Q8NGD5 310 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 TSPEARQ8WU66 669 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 CPNE4Q96A23 557 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 MCUR1Q96AQ8 359 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 KTI12Q96EK9 354 aaPredicted RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 KLHL15Q96M94 604 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 MUS81Q96NY9 551 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 EGFL8Q99944 293 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 RNPEPL1Q9HAU8 725 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 TIGARQ9NQ88 270 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 LYARQ9NX58 379 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 NDE1Q9NXR1 346 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 FLRT3Q9NZU0 649 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 PRODH2Q9UF12 536 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 RPUSD1Q9UJJ7 312 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 ZNF225Q9UK10 706 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 PRPF19Q9UMS4 504 aaKnown RBP5.91□□□□□ -1.46
CHD3-213ENST00000571249 OARD1Q9Y530 152 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 DNAJC15Q9Y5T4 150 aa5.91□□□□□ -1.46
CHD3-213ENST00000571249 SUPT3HB4E1H0 165 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 PLPP1O14494 284 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 UBDO15205 165 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 SUPT3HO75486 399 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 APOL3O95236 402 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 HPXP02790 462 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 ADRA2AP08913 450 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 FAM58BPP0C7Q3 252 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 UROSP10746 265 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 PCNAP12004 261 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 LYL1P12980 280 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 PORP16435 677 aaPredicted RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 ME2P23368 584 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 GATA3P23771 443 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 PSMA4P25789 261 aaKnown RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 SHC1P29353 583 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 SFTPDP35247 375 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 EMDP50402 254 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 CDH13P55290 713 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 TMEM33P57088 247 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 KRTAP10-11P60412 298 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 ACTR3P61158 418 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 MRPS22P82650 360 aaKnown RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 SLC25A3Q00325 362 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 MALLQ13021 153 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 MAPRE2Q15555 327 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 HIST2H2ACQ16777 129 aaPredicted RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 SMU1Q2TAY7 513 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 PRICKLE4Q2TBC4 344 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 TRMT5Q32P41 509 aaKnown RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 C3orf36Q3SXR2 165 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 TRMT12Q53H54 448 aaKnown RBP5.9□□□□□ -1.46
CHD3-213ENST00000571249 XKR7Q5GH72 579 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 COQ5Q5HYK3 327 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 FBXW9Q5XUX1 488 aa5.9□□□□□ -1.46
CHD3-213ENST00000571249 HIST2H2AA3Q6FI13 130 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms