RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ACOT8O14734 319 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 AKR7A3O95154 331 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 OR5F1O95221 314 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 LYPD3O95274 346 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 FUT4P22083 530 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 FKBP2P26885 142 aaKnown RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 CLK1P49759 484 aaKnown RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 RAC3P60763 192 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 SLC35A1P78382 337 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 VLDLRP98155 873 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 IL1RL1Q01638 556 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 ST3GAL3Q11203 375 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 TRAP1Q12931 704 aaKnown RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 FLOT2Q14254 428 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 ACKR1Q16570 336 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 LCN8Q6JVE9 175 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 FCRLAQ7L513 359 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 ADGRE4PQ86SQ3 457 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 ZDHHC21Q8IVQ6 265 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 CCDC103Q8IW40 242 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 STK35Q8TDR2 534 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 ABHD3Q8WU67 409 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM255BQ8WV15 326 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 TAAR8Q969N4 342 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 C12orf10Q9HB07 376 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 JKAMPQ9P055 326 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 SLC7A8Q9UHI5 535 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 PRDM4Q9UKN5 801 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 A4GNTQ9UNA3 340 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 AURKCQ9UQB9 309 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 POMPQ9Y244 141 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF175Q9Y473 711 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 TESMINQ9Y4I5 508 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 TLN2Q9Y4G6 2542 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 KIAA1549Q9HCM3 1950 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 TCRBV5S2A0A599 114 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 LIPT2A6NK58 231 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 LRRN3E7EW58 273 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 HAX1O00165 279 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 FFAR1O14842 300 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 SMAD9O15198 467 aaKnown RBP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 CIB2O75838 187 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 SMNDC1O75940 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 RCBTB2O95199 551 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 PMS2P2O95744 297 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 TP53P04637 393 aaPredicted RBP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 FABP3P05413 133 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 GPIP06744 558 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 FCGR2AP12318 317 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 MAP2K6P52564 334 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 CTBP2P56545 445 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 SPIBQ01892 262 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 EGR4Q05215 589 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 CHRNB3Q05901 458 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 OTUD3Q5T2D3 398 aaPredicted RBP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 C20orf204Q6ZNR8 217 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 TSEN54Q7Z6J9 526 aaKnown RBP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 OR52J3Q8NH60 311 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 PFN4Q8NHR9 129 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 PIK3IP1Q96FE7 263 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 MPP4Q96JB8 637 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF300Q96RE9 604 aaPredicted RBP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 EPYCQ99645 322 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 PRSS27Q9BQR3 290 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
CCDC40-205ENST00000571028 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF226Q9NYT6 803 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 NDUFAF4Q9P032 175 aa11.82□□□□□ -0.52
CCDC40-205ENST00000571028 TRAV36DV7A0A075B6V5 113 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF814B7Z6K7 855 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 PIP5K1CO60331 668 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 RAMP1O60894 148 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 CH25HO95992 272 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 UMPSP11172 480 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 ITGA2P17301 1181 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 UGT2B15P54855 530 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
CCDC40-205ENST00000571028 RASGEF1BQ0VAM2 473 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 TRAM2Q15035 370 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 FAM98BQ52LJ0 330 aaKnown RBP11.81□□□□□ -0.52
CCDC40-205ENST00000571028 MTX3Q5HYI7 312 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 FGD3Q5JSP0 725 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 SWT1Q5T5J6 900 aaKnown RBP11.81□□□□□ -0.52
CCDC40-205ENST00000571028 C1orf146Q5VVC0 180 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 GTF2IRD2BQ6EKJ0 949 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 OR2A2Q6IF42 318 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 ASRGL1Q7L266 308 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 GTF2IRD2Q86UP8 949 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 MEX3DQ86XN8 651 aaKnown RBP11.81□□□□□ -0.52
CCDC40-205ENST00000571028 TUSC5Q8IXB3 177 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM99Q8N816 258 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM239Q8WW34 195 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 RSRC1Q96IZ7 334 aaKnown RBP11.81□□□□□ -0.52
CCDC40-205ENST00000571028 C7orf34Q96L11 122 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 PTDSS2Q9BVG9 487 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 GSX2Q9BZM3 304 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 POLR2J2Q9GZM3 115 aaKnown RBP11.81□□□□□ -0.52
CCDC40-205ENST00000571028 POLR2J3Q9H1A7 115 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms