RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CSF2RBP32927 897 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ENPP2Q13822 863 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 SHEQ5VZ18 495 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 C3orf33Q6P1S2 294 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 TTLL10Q6ZVT0 673 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 PARS2Q7L3T8 475 aaKnown RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 TMEM150AQ86TG1 271 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 PEG10Q86TG7 708 aaKnown RBP10.06□□□□□ -0.8
PALB2-206ENST00000568219 NAA40Q86UY6 237 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 ACBD4Q8NC06 268 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 OR1M1Q8NGA1 313 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 RASD2Q96D21 266 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 IGSF21Q96ID5 467 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 KLHL15Q96M94 604 aa10.06□□□□□ -0.8
PALB2-206ENST00000568219 DSPPQ9NZW4 1301 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 A0A0D9SG52 128 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 OR6C65A6NJZ3 312 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 BSGP35613 385 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 RAB2AP61019 212 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 BAMBIQ13145 260 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 RIN1Q13671 783 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 TEAD2Q15562 447 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 FAM209BQ5JX69 171 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 DCAF12L2Q5VW00 463 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PSRC1Q6PGN9 363 aaPredicted RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 OR2L3Q8NG85 312 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 OR4D10Q8NGI6 311 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 SLC35A4Q96G79 324 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PEX11GQ96HA9 241 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 TMEM41AQ96HV5 264 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 TRIM2Q9C040 744 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 CHST6Q9GZX3 395 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 C6orf106Q9H6K1 298 aaPredicted RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 DEC1Q9P2X7 70 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 GRHPRQ9UBQ7 328 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 IGLON5A6NGN9 336 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 GGT3PA6NGU5 568 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 B4GALT2O60909 372 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 SLC25A12O75746 678 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 RAB40ALP0C0E4 278 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 F3P13726 295 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 HIST1H1CP16403 213 aaKnown RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 OPRD1P41143 372 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 CTXN1P60606 82 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 SPOCK1Q08629 439 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 POU4F2Q12837 409 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 RAB11BQ15907 218 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 NHLRC3Q5JS37 347 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 LDLRAD1Q5T700 205 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 B3GNTL1Q67FW5 361 aaPredicted RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 RNF165Q6ZSG1 346 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 DPY19L4Q7Z388 723 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 OR52H1Q8NGJ2 320 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 OR5M9Q8NGP3 310 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 RAB40AQ8WXH6 277 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 HGDQ93099 445 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 MARVELD3Q96A59 401 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 SRMSQ9H3Y6 488 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 KCMF1Q9P0J7 381 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 MRPS23Q9Y3D9 190 aaKnown RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 TRBV23-1A0A0A0MS06 115 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PAPLNO95428 1278 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 HLA-DQB1P01920 261 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 TMIGD3P0DMS9 266 aaPredicted RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 SPP1P10451 314 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 CPT2P23786 658 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 AVPR2P30518 371 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 CD80P33681 288 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 SLC9A3R2Q15599 337 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 GUCA2BQ16661 112 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 EXOSC6Q5RKV6 272 aaKnown RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 TPGS2Q68CL5 300 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 ARMC6Q6NXE6 501 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 LCTLQ6UWM7 567 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PRSS58Q8IYP2 241 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 ARIH2OSQ8N7S6 290 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PMM1Q92871 262 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PELI1Q96FA3 418 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 CST11Q9H112 138 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 PIGMQ9H3S5 423 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 KCNK15Q9H427 330 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 NCDNQ9UBB6 729 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 NDOR1Q9UHB4 597 aa10.05□□□□□ -0.8
PALB2-206ENST00000568219 ZNF230Q9UIE0 474 aaPredicted RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 ZNF346Q9UL40 294 aaKnown RBP10.05□□□□□ -0.8
PALB2-206ENST00000568219 POM121BA6NF01 834 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 TRIM77I1YAP6 450 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 CTNSO60931 367 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 SNAPC5O75971 98 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 BDKRB2P30411 391 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 POU3F4P49335 361 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 METAP1P53582 386 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 ACTBP60709 375 aa10.04□□□□□ -0.8
PALB2-206ENST00000568219 ACTG1P63261 375 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms