RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 AQP7P3A6NL99 342 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 BOLA2-SMG1P6H3BVE0 249 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 RTCAO00442 366 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 MID1O15344 667 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 BCAT2O15382 392 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SEC14L5O43304 696 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TLX2O43763 284 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TPST2O60704 377 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 HCN1O60741 890 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TRIM3O75382 744 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 GPX5O75715 221 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 PIAS2O75928 621 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 AIFM1O95831 613 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 DNTTP04053 509 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 HMGN2P05204 90 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SERPIND1P05546 499 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 DBIP07108 87 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 NHLRC4P0CG21 123 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TNNI3P19429 210 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 HTR1FP30939 366 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SDC2P34741 201 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 MTNR1AP48039 350 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 RGS8P57771 180 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TAS2R43P59537 309 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 YPEL5P62699 121 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 EFNB1P98172 346 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 IFITM3Q01628 133 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TNFRSF17Q02223 184 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SCN1BQ07699 218 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 LASP1Q14847 261 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SSX1Q16384 188 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 RPE65Q16518 533 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 HLA-BQ31612 363 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF750Q32MQ0 723 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 GPAT3Q53EU6 434 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 NXNL2Q5VZ03 156 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 CDC73Q6P1J9 531 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 MZT2AQ6P582 158 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 XKRXQ6PP77 449 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 CD200R1LQ6Q8B3 271 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 DHRS13Q6UX07 377 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF730Q6ZMV8 503 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 NCCRP1Q6ZVX7 275 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 MBOAT2Q6ZWT7 520 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 ABHD13Q7L211 337 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SZRD1Q7Z422 152 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 ZER1Q7Z7L7 766 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TRIM73Q86UV7 250 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 IQCHQ86VS3 1027 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 RANBP3LQ86VV4 465 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 AMIGO1Q86WK6 493 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SFTPA1Q8IWL2 248 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 PHC2Q8IXK0 858 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 GPALPP1Q8IXQ4 340 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 CADM3Q8N126 398 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 LRRC25Q8N386 305 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TCEANCQ8N8B7 351 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 AVL9Q8NBF6 648 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 POGLUT1Q8NBL1 392 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OR2T33Q8NG76 320 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OR52L1Q8NGH7 329 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OR6T1Q8NGN1 323 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 DDB2Q92466 427 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 ELP4Q96EB1 424 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OR2M4Q96R27 311 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OR7D2Q96RA2 312 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OR5M11Q96RB7 305 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 STACQ99469 402 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 GABRG3Q99928 467 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 TRAF4Q9BUZ4 470 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SORBS1Q9BX66 1292 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SLC17A9Q9BYT1 436 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SLC22A4Q9H015 551 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 OSGEPL1Q9H4B0 414 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 HHATLQ9HCP6 504 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 LYRM4Q9HD34 91 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 EXOSC4Q9NPD3 245 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 FSCN3Q9NQT6 498 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 IL20Q9NYY1 176 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 RABL2AQ9UBK7 228 aaPredicted RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 CES1P1Q9UKY3 287 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 PLAGL1Q9UM63 463 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 RABL2BQ9UNT1 228 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 NCKAP1Q9Y2A7 1128 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 CMAHPQ9Y471 501 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 CDH10Q9Y6N8 788 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 DENND4CQ5VZ89 1909 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 COL12A1Q99715 3063 aa4.83□□□□□ -1.64
CAPN3-217ENST00000567817 SPTBN1Q01082 2364 aaKnown RBP4.83□□□□□ -1.64
CAPN3-217ENST00000567817 PIKFYVEQ9Y2I7 2098 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CROCCQ5TZA2 2017 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 ADAMTS9Q9P2N4 1935 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 IGKV1-8A0A0C4DH67 115 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 CLEC18AA5D8T8 446 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 TTC36A6NLP5 189 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 OR5K4A6NMS3 321 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 K7ENP7 123 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 AP4M1O00189 453 aa4.82□□□□□ -1.64
CAPN3-217ENST00000567817 LCMT2O60294 686 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms