RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PINLYPA6NC86 204 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 SHISA8B8ZZ34 492 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 BLOC1S5-TXNDC5H3BN57 136 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 IMPA2O14732 288 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 ARPC3O15145 178 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 SURF4O15260 269 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 HPNP05981 417 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 PEPDP12955 493 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 CRHBPP24387 322 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 GDF1P27539 372 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 GTF2E2P29084 291 aaKnown RBP17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 GRPRP30550 384 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 RPL4P36578 427 aaKnown RBP17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 CD97P48960 835 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 MEOX1P50221 254 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 RAC1P63000 192 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 TOMM20Q15388 145 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 ARHGAP11AQ6P4F7 1023 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 IGFL3Q6UXB1 125 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 GALNTL5Q7Z4T8 443 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 CNTRLQ7Z7A1 2325 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 ZFP62Q8NB50 900 aaPredicted RBP17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 OR14L1PQ8NHC6 308 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 SLC25A36Q96CQ1 311 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 FN3KQ9H479 309 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 KLHL1Q9NR64 748 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 ALKBH4Q9NXW9 302 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 RPH3AQ9Y2J0 694 aaPredicted RBP17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 PCDHGB7Q9Y5F8 929 aa17.17■□□□□ 0.34
CSPG4P13-201ENST00000565545 NOTCH2Q04721 2471 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 LIPT2A6NK58 231 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 SNTNA6NMZ2 147 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 TTLL8A6PVC2 850 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 H3BML4 177 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 M0R3G1 203 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 TLX2O43763 284 aaPredicted RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 PRKYO43930 277 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 MRPS14O60783 128 aaKnown RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 TRAPPC6AO75865 159 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 GLSO94925 669 aaPredicted RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 AGFG2O95081 481 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 OR6A2O95222 327 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 IFNGP01579 166 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 CD14P08571 375 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 RFPL3SP0C7P2 107 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 IL11P20809 199 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 FMO3P31513 532 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 B3GALT5-AS1P59052 145 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 PLGLB1Q02325 96 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 PMS2P3Q13401 168 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 ALG10Q5BKT4 473 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 SLC6A19Q695T7 634 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 CCDC103Q8IW40 242 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 LRRC75AQ8NAA5 344 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 ADPRHL1Q8NDY3 354 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 FAM83FQ8NEG4 500 aaPredicted RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 ATP6V1C2Q8NEY4 427 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 BPIFB6Q8NFQ5 453 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 TSPAN14Q8NG11 270 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 OR5M1Q8NGP8 315 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 IPCEF1Q8WWN9 437 aaPredicted RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 ARL5BQ96KC2 179 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 IL4I1Q96RQ9 567 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 HES7Q9BYE0 225 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 TTTY12Q9BZ98 90 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 ENKD1Q9H0I2 346 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 ZNF703Q9H7S9 590 aaPredicted RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 CCNB1IP1Q9NPC3 277 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 NRIP3Q9NQ35 241 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 CMC2Q9NRP2 79 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 IL20RAQ9UHF4 553 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 KLHL21Q9UJP4 597 aa17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 SPTAN1Q13813 2472 aaKnown RBP17.16■□□□□ 0.34
CSPG4P13-201ENST00000565545 A0A087WXM4 84 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 PPP1R3DO95685 299 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 IMPDH2P12268 514 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 NOS3P29474 1203 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 AQP2P41181 271 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 RPL18Q07020 188 aaKnown RBP17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 ZP4Q12836 540 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 MYBPHQ13203 477 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 TMEM176BQ3YBM2 270 aaPredicted RBP17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 TMEM154Q6P9G4 183 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 H1FNTQ75WM6 255 aaPredicted RBP17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 SLC22A16Q86VW1 577 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 ZADH2Q8N4Q0 377 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 FAM98AQ8NCA5 519 aaKnown RBP17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 MOSPD2Q8NHP6 518 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 ERMAPQ96PL5 475 aaPredicted RBP17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 MRPS26Q9BYN8 205 aaKnown RBP17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 B3GALT5Q9Y2C3 310 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 NCKAP5O14513 1909 aa17.15■□□□□ 0.34
CSPG4P13-201ENST00000565545 FREM3P0C091 2139 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 RIIAD1A6NNX1 92 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 MCIDASD6RGH6 385 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 ACOT7O00154 380 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 PLPP3O14495 311 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 FAM20BO75063 409 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 PMS2P2O95744 297 aa17.14■□□□□ 0.33
CSPG4P13-201ENST00000565545 TXNDC12O95881 172 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms