RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 DSTNP60981 165 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 COPZ1P61923 177 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 TUBA1BP68363 451 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 TUBA4AP68366 448 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 HOXC5Q00444 222 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ROR2Q01974 943 aaKnown RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 NAAAQ02083 359 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 LARS2Q15031 903 aaKnown RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 RGNQ15493 299 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 EFNB3Q15768 340 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 KRTAP24-1Q3LI83 254 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PRAMEF8Q5VWM4 474 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PRAMEF7Q5VXH5 474 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 NIPAL3Q6P499 406 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 KLHL24Q6TFL4 600 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 MSANTD1Q6ZTZ1 278 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 TUBA1AQ71U36 451 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 HDXQ7Z353 690 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ABHD12BQ7Z5M8 362 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 MYPOPQ86VE0 399 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 COMTD1Q86VU5 262 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ANKS4BQ8N8V4 417 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ANKRD42Q8N9B4 389 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ANKK1Q8NFD2 765 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 OR9I1Q8NGQ6 314 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 GTF2H4Q92759 462 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 MAL2Q969L2 176 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF837Q96EG3 531 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 KTI12Q96EK9 354 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 TMEM19Q96HH6 336 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 OR52B2Q96RD2 323 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 DOK1Q99704 481 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 SOX7Q9BT81 388 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PAIP1Q9H074 479 aaKnown RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 SHARPINQ9H0F6 387 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PLK3Q9H4B4 646 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 BCL2L10Q9HD36 194 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ZIM2Q9NZV7 527 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 LPAR3Q9UBY5 353 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF232Q9UNY5 417 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PCDHB14Q9Y5E9 798 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 IGKV1D-42A0A075B6H8 117 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 LOC100289279A0A1B0GTE1 492 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 LOC102725191A0A1B0GVB3 256 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 TMEM120BA0PK00 339 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF503-AS2A6NEH8 195 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 OR6C65A6NJZ3 312 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 SLCO1B7G3V0H7 640 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 CLIC1O00299 241 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 KRT33AO76009 404 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 PDE5AO76074 875 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 CELA3BP08861 270 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 HOXB1P14653 301 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 CBR1P16152 277 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 NCF2P19878 526 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 RPS5P46782 204 aaKnown RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 PPOXP50336 477 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 SLC18A1P54219 525 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 UBE2NP61088 152 aaKnown RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 SNRPD2P62316 118 aaKnown RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 ARF1P84077 181 aaKnown RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 GGTLC2Q14390 218 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF311Q5JNZ3 666 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 FAM120AOSQ5T036 256 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 HHATQ5VTY9 493 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 ATG16L1Q676U5 607 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 NXNQ6DKJ4 435 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 FAM166AQ6J272 317 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 VHLLQ6RSH7 139 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 C6orf89Q6UWU4 347 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 NHLRC1Q6VVB1 395 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 IL17RELQ6ZVW7 336 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 ZCCHC24Q8N2G6 241 aaKnown RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 C10orf111Q8N326 155 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 LSMEM1Q8N8F7 131 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 NUP37Q8NFH4 326 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 OR4F15Q8NGB8 312 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 TAAR8Q969N4 342 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 SLC35B4Q969S0 331 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 SLC25A36Q96CQ1 311 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 ITCHQ96J02 903 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 OXGR1Q96P68 337 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 VRK1Q99986 396 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 PIMREGQ9BSJ6 248 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 BPESC1Q9GZL8 116 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 A4GALTQ9NPC4 353 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 THUMPD1Q9NXG2 353 aaKnown RBP7.44□□□□□ -1.22
CAPN3-213ENST00000565173 IFT52Q9Y366 437 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 FKBP7Q9Y680 259 aa7.44□□□□□ -1.22
CAPN3-213ENST00000565173 MS4A18H0YCH9 400 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 AHSA1O95433 338 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 ANP32DO95626 131 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 STAMBPO95630 424 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 APEHP13798 732 aaKnown RBP7.43□□□□□ -1.22
CAPN3-213ENST00000565173 ETS2P15036 469 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF23P17027 643 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF43P17038 809 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 GIFP27352 417 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 HTR2AP28223 471 aa7.43□□□□□ -1.22
CAPN3-213ENST00000565173 THBS4P35443 961 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms