RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 POLR2IP36954 125 aaKnown RBP11.5□□□□□ -0.57
CLK3-214ENST00000564096 GIPRP48546 466 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 CLDN20P56880 219 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 CARD18P57730 90 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 MYBPC1Q00872 1141 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 LTBQ06643 244 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 CTU2Q2VPK5 515 aaKnown RBP11.5□□□□□ -0.57
CLK3-214ENST00000564096 GXYLT1Q4G148 440 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 C12orf73Q69YU5 71 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 GPR139Q6DWJ6 353 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 VASNQ6EMK4 673 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 USP51Q70EK9 711 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 THAP5Q7Z6K1 395 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 JAZF1Q86VZ6 243 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 UEVLDQ8IX04 471 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 LNX2Q8N448 690 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 IQCF1Q8N6M8 205 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 RELTQ969Z4 430 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 ADGRG7Q96K78 797 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 GPR137Q96N19 417 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 KATNB1Q9BVA0 655 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 LUZP4Q9P127 313 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 NOX1Q9Y5S8 564 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 PTPRQQ9UMZ3 2332 aa11.5□□□□□ -0.57
CLK3-214ENST00000564096 NPIPB13A6NJU9 1138 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 NPIPB4C9JG80 1138 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 C11orf98E9PRG8 122 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 BHLHE40O14503 412 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 XKRYO14609 159 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 IMPA2O14732 288 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 ARPC3O15145 178 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 IDH3BO43837 385 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 CXCL13O43927 109 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 AKR7A3O95154 331 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 IGHMP01871 453 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 IGFBP1P08833 259 aaPredicted RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 PAICSP22234 425 aaKnown RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 EPHA2P29317 976 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 PCYT1AP49585 367 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 STARP49675 285 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 FXYD6P3P58550 94 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 CTXN1P60606 82 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 CDK5Q00535 292 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 POU3F1Q03052 451 aaPredicted RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 SRYQ05066 204 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 C19orf57Q0VDD7 668 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 ZP4Q12836 540 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 TOP3AQ13472 1001 aaPredicted RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 C1DQ13901 141 aaKnown RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 SF3B4Q15427 424 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■■□ 21.3
CLK3-214ENST00000564096 SNAPC1Q16533 368 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 ZNF239Q16600 458 aaKnown RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 KRTCAP3Q53RY4 240 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 EMC4Q5J8M3 183 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 Q6ZPB1 254 aaPredicted RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 PXKQ7Z7A4 578 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 GPAT4Q86UL3 456 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 MARVELD2Q8N4S9 558 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 OR8J1Q8NGP2 316 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 MOSPD2Q8NHP6 518 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 TRUB1Q8WWH5 349 aaKnown RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 MUS81Q96NY9 551 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 ERMAPQ96PL5 475 aaPredicted RBP11.49□□□□□ -0.57
CLK3-214ENST00000564096 FANCFQ9NPI8 374 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 NRIP3Q9NQ35 241 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 PNPLA3Q9NST1 481 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 TVP23BQ9NYZ1 205 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 SPRR3Q9UBC9 169 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 GRHPRQ9UBQ7 328 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 IL20RAQ9UHF4 553 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 KLHL21Q9UJP4 597 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 CAMK2AQ9UQM7 478 aa11.49□□□□□ -0.57
CLK3-214ENST00000564096 CELSR3Q9NYQ7 3312 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 ZFHX4Q86UP3 3567 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 FRYQ5TBA9 3013 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 A6NIZ1 184 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 SNTNA6NMZ2 147 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 NPIPA2E9PIF3 369 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 E9PQ18 207 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 NPIPA3F8WFD2 350 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 SERPINI2O75830 405 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 CLIC3O95833 236 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 GNAO1P09471 354 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 NR2C1P13056 603 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 CPN1P15169 458 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 SDHAP31040 664 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 AGFG1P52594 562 aaKnown RBP11.48□□□□□ -0.57
CLK3-214ENST00000564096 SUCLG1P53597 346 aaKnown RBP11.48□□□□□ -0.57
CLK3-214ENST00000564096 CLDN15P56746 228 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 RAP1BP61224 184 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 RAP1AP62834 184 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 TEKQ02763 1124 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 KRR1Q13601 381 aaKnown RBP11.48□□□□□ -0.57
CLK3-214ENST00000564096 FHL1Q13642 323 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 PDK3Q15120 406 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 POU4F3Q15319 338 aa11.48□□□□□ -0.57
CLK3-214ENST00000564096 TMEM236Q5W0B7 351 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms