RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 ZNF354AO60765 605 aaPredicted RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 PSIP1O75475 530 aaKnown RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 TRAPPC6AO75865 159 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 KDM4BO94953 1096 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 VENTXO95231 258 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 OR2T7P0C7T2 308 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 S1PR1P21453 382 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 CCKARP32238 428 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 CDKN1AP38936 164 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 MAGEA1P43355 309 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 TTPAP49638 278 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 BTG2P78543 158 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 ACVR1Q04771 509 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 RGS1Q08116 209 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 FUT7Q11130 342 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 BIKQ13323 160 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 RAB35Q15286 201 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 BCL2A1Q16548 175 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 ZNF672Q499Z4 452 aaPredicted RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 FASTKD1Q53R41 847 aaKnown RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 C11orf63Q6NUN7 778 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 CASC4Q6P4E1 433 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 AFTPHQ6ULP2 937 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 CCBE1Q6UXH8 406 aaPredicted RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 MEPCEQ7L2J0 689 aaKnown RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 CHMP1BQ7LBR1 199 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 EXOC3L1Q86VI1 746 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 GRAMD2AQ8IUY3 354 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PLD3Q8IV08 490 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 KLHL7Q8IXQ5 586 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 RNF113BQ8IZP6 322 aaKnown RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 MFSD9Q8NBP5 474 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PPFIBP2Q8ND30 876 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 ZNF540Q8NDQ6 660 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 OR5T3Q8NGG3 340 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 BBS10Q8TAM1 723 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 C10orf105Q8TEF2 133 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 ANKRD7Q92527 254 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PEX13Q92968 403 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PHF21AQ96BD5 680 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 ANKRD9Q96BM1 317 aaPredicted RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 MOB3AQ96BX8 217 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PRAP1Q96NZ9 151 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 TUBA1CQ9BQE3 449 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PIGQQ9BRB3 760 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 KATNB1Q9BVA0 655 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 P2RY12Q9H244 342 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 PNO1Q9NRX1 252 aaKnown RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 KLHL9Q9P2J3 617 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 COPS7AQ9UBW8 275 aa4.83□□□□□ -1.64
TCF4-220ENST00000563824 CHCHD2Q9Y6H1 151 aaPredicted RBP4.83□□□□□ -1.64
TCF4-220ENST00000563824 H3BMM5 538 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 BOLA2-SMG1P6H3BVE0 249 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 GFYI3L273 518 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 RTCAO00442 366 aaKnown RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 SHOX2O60902 331 aaPredicted RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 ACSL3O95573 720 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 TGFAP01135 160 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 GBAP04062 536 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 ATP6V1B1P15313 513 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 ZNF10P21506 573 aaPredicted RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 RPS3P23396 243 aaKnown RBP eCLIP4.82□□□□□ -1.64
TCF4-220ENST00000563824 AHRP35869 848 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 SLCO1A2P46721 670 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 TMED10P49755 219 aaKnown RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 PGGT1BP53609 377 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 CDH17Q12864 832 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 TSTA3Q13630 321 aaPredicted RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 SERTAD2Q14140 314 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 EFTUD2Q15029 972 aaKnown RBP eCLIP4.82□□□□□ -1.64
TCF4-220ENST00000563824 ZNF674Q2M3X9 581 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 DEFB134Q4QY38 66 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 CTSL3PQ5NE16 218 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 PTRHD1Q6GMV3 140 aaKnown RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 IL17RELQ6ZVW7 336 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 ZNF550Q7Z398 422 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 P4HA3Q7Z4N8 544 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 PRUNE1Q86TP1 453 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 LINC00523Q86TU6 105 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 VSTM4Q8IW00 320 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 GCNT2Q8N0V5 402 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 GBGT1Q8N5D6 347 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 BANPQ8N9N5 519 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 ZNF740Q8NDX6 193 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 NT5CQ8TCD5 201 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 MGARPQ8TDB4 240 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 GRK7Q8WTQ7 553 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 TANKQ92844 425 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 MRPL24Q96A35 216 aaKnown RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 OTUB1Q96FW1 271 aaPredicted RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 TMEM19Q96HH6 336 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 JSRP1Q96MG2 331 aaPredicted RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 BIRC8Q96P09 236 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 LMF2Q9BU23 707 aaKnown RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 MMADHCQ9H3L0 296 aaPredicted RBP4.82□□□□□ -1.64
TCF4-220ENST00000563824 SLA2Q9H6Q3 261 aa4.82□□□□□ -1.64
TCF4-220ENST00000563824 PROK2Q9HC23 129 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms