RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 LAMA5O15230 3695 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 EIF4E1BA6NMX2 242 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TNFSF11O14788 317 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TLX2O43763 284 aaPredicted RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 MPZL2O60487 215 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SMNDC1O75940 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMG1-208ENST00000563448 HMGN1P05114 100 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 CD14P08571 375 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 GTF2E2P29084 291 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 P2RY4P51582 365 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 CLDN15P56746 228 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ERVK-25P63136 954 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ZP4Q12836 540 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 LINC00303Q3SY05 128 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 H1FNTQ75WM6 255 aaPredicted RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 FAM122BQ7Z309 247 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 BCDIN3DQ7Z5W3 292 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 KDM8Q8N371 416 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TMEM99Q8N816 258 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TMEM163Q8TC26 289 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ADGRG7Q96K78 797 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SLC38A2Q96QD8 506 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 KATNB1Q9BVA0 655 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 PRRG3Q9BZD7 231 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ZDHHC11Q9H8X9 412 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 GPR52Q9Y2T5 361 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 IGF2RP11717 2491 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ARHGAP21Q5T5U3 1957 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 GJE1A6NN92 205 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ZNF814B7Z6K7 855 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 SLC1A7O00341 560 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ARPC3O15145 178 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 SEC14L5O43304 696 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 KLK2P20151 261 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 POU3F2P20265 443 aaPredicted RBP9.11□□□□□ -0.95
SMG1-208ENST00000563448 LHX2P50458 406 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 SLC35A1P78382 337 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 TEKQ02763 1124 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ZNF239Q16600 458 aaKnown RBP9.11□□□□□ -0.95
SMG1-208ENST00000563448 RBM48Q5RL73 367 aaKnown RBP9.11□□□□□ -0.95
SMG1-208ENST00000563448 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ARHGAP11AQ6P4F7 1023 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 UBQLNLQ8IYU4 475 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 FAM26EQ8N5C1 309 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ADPRHL1Q8NDY3 354 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 BPIFB6Q8NFQ5 453 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ZNF566Q969W8 418 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 CRELD1Q96HD1 420 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 Q96M85 177 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 TSPAN32Q96QS1 320 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 TEX12Q9BXU0 123 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ZNF696Q9H7X3 374 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 FANCFQ9NPI8 374 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 CMC2Q9NRP2 79 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 INIPQ9NRY2 104 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 ZNF346Q9UL40 294 aaKnown RBP9.11□□□□□ -0.95
SMG1-208ENST00000563448 MYRFQ9Y2G1 1151 aa9.11□□□□□ -0.95
SMG1-208ENST00000563448 EIF1AYO14602 144 aaKnown RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 IMPA2O14732 288 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 RNF13O43567 381 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 XPNPEP2O43895 674 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 ENTPD6O75354 484 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 OR6A2O95222 327 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 PLGP00747 810 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 HLA-DOBP13765 273 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 APEHP13798 732 aaKnown RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 HIST1H1CP16403 213 aaKnown RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 ZNF24P17028 368 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 AHCYP23526 432 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CRHBPP24387 322 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 NOS3P29474 1203 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CLDN18P56856 261 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CXCR4P61073 352 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 PUDPQ08623 228 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 TOP3AQ13472 1001 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 OCLNQ16625 522 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 SLC25A30Q5SVS4 291 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 ESPNLQ6ZVH7 1005 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 NEIL3Q8TAT5 605 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 RASD2Q96D21 266 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 PLEKHA8Q96JA3 519 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 TAAR6Q96RI8 345 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 YTHDF1Q9BYJ9 559 aaKnown RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 SRXN1Q9BYN0 137 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 HINT3Q9NQE9 182 aaKnown RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 PLCXD1Q9NUJ7 323 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CLN6Q9NWW5 311 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 DNAJC27Q9NZQ0 273 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 B3GALT5Q9Y2C3 310 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 CFAP47Q6ZTR5 3102 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 ANKRD11Q6UB99 2663 aaPredicted RBP9.1□□□□□ -0.95
SMG1-208ENST00000563448 MED12LQ86YW9 2145 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 TRGV5A0A0B4J1U4 118 aa9.1□□□□□ -0.95
SMG1-208ENST00000563448 TEX13CA0A0J9YWL9 993 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms