RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FBXO25Q8TCJ0 367 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 RAB8BQ92930 207 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 PPCDCQ96CD2 204 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 KTI12Q96EK9 354 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 L3HYPDHQ96EM0 354 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 CHMP6Q96FZ7 201 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 METTL2AQ96IZ6 378 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF350Q9GZX5 532 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 IQCGQ9H095 443 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 DPH5Q9H2P9 285 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 GSTO2Q9H4Y5 243 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 NKIRAS2Q9NYR9 191 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF224Q9NZL3 707 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 SH3BP4Q9P0V3 963 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 PURGQ9UJV8 347 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 OSGIN1Q9UJX0 560 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 MKLN1Q9UL63 735 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 FZR1Q9UM11 496 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 TMED7Q9Y3B3 224 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 INSIG2Q9Y5U4 225 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 IGLV3-9A0A075B6K5 115 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 IGHV1-69-2A0A0G2JMI3 117 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 LIPT2A6NK58 231 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CLDN25C9JDP6 229 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CCDC188H7C350 402 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 AP3D1O14617 1153 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 HOXA3O43365 443 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 KRT33AO76009 404 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 GPANK1O95872 356 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 RYKP34925 604 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CCT3P49368 545 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CCL8P80075 99 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CEACAM7Q14002 265 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 GPR68Q15743 365 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 UAP1Q16222 522 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 IMPG1Q17R60 797 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 ALKBH6Q3KRA9 238 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 ARHGAP11BQ3KRB8 267 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 NIPAL3Q6P499 406 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 ZDHHC24Q6UX98 284 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 USP51Q70EK9 711 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 REC114Q7Z4M0 266 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 GSPT2Q8IYD1 628 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 GLB1L3Q8NCI6 653 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CLHC1Q8NHS4 586 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 KIF18AQ8NI77 898 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 PMM1Q92871 262 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 DDIT4LQ96D03 193 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 TSSK3Q96PN8 268 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 TSPAN32Q96QS1 320 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CCT7Q99832 543 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 ERP44Q9BS26 406 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM216Q9P0N5 145 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF346Q9UL40 294 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 STK38LQ9Y2H1 464 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 AUP1Q9Y679 476 aa6.53□□□□□ -1.36
HERPUD1-206ENST00000563343 CLDN24A6NM45 220 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 A8MXK9 166 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 SRRM5B3KS81 715 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 SEC22BO75396 215 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 STX11O75558 287 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 FOXH1O75593 365 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 SEC14L2O76054 403 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 CLPTM1O96005 669 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 HLA-HP01893 362 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 KRT16P08779 473 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 TCP1P17987 556 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 TACR3P29371 465 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 RAD52P43351 418 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 MTNR1AP48039 350 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 IDH2P48735 452 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 POLR2HP52434 150 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 PRKAA2P54646 552 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 ETF1P62495 437 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 FUT5Q11128 374 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 CALCOCO2Q13137 446 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 HNRNPA0Q13151 305 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 TP53BP2Q13625 1128 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 OR7A5Q15622 319 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 CEACAM16Q2WEN9 425 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 PHYHD1Q5SRE7 291 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 TYW3Q6IPR3 259 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 C11orf87Q6NUJ2 197 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 FIP1L1Q6UN15 594 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 EIF3MQ7L2H7 374 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 GPAT4Q86UL3 456 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 TREML1Q86YW5 311 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 LRRC8AQ8IWT6 810 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 CCDC36Q8IYA8 594 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 OR56A1Q8NGH5 318 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 OR2T11Q8NH01 316 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 LINC01006Q8NI28 216 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 FAM110DQ8TAY7 271 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 MRAPQ8TCY5 172 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 GTF3AQ92664 365 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 ZG16BQ96DA0 208 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 TRIM44Q96DX7 344 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 MTERF3Q96E29 417 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms